Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
RPGRIP1LQ68CZ1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.31■■■□□ 2.6
RPGRIP1LQ68CZ1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RPGRIP1LQ68CZ1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
RPGRIP1LQ68CZ1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
RPGRIP1LQ68CZ1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RPGRIP1LQ68CZ1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
RPGRIP1LQ68CZ1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.3■■■□□ 2.6
RPGRIP1LQ68CZ1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.3■■■□□ 2.6
RPGRIP1LQ68CZ1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.3■■■□□ 2.6
RPGRIP1LQ68CZ1 AC005224.4-201ENST00000583262 1652 ntBASIC31.3■■■□□ 2.6
RPGRIP1LQ68CZ1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.3■■■□□ 2.6
RPGRIP1LQ68CZ1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31.3■■■□□ 2.6
RPGRIP1LQ68CZ1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RPGRIP1LQ68CZ1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RPGRIP1LQ68CZ1 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.29■■■□□ 2.6
RPGRIP1LQ68CZ1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RPGRIP1LQ68CZ1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC31.29■■■□□ 2.6
RPGRIP1LQ68CZ1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC31.29■■■□□ 2.6
RPGRIP1LQ68CZ1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RPGRIP1LQ68CZ1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RPGRIP1LQ68CZ1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RPGRIP1LQ68CZ1 AC009237.3-201ENST00000393279 1427 ntBASIC31.28■■■□□ 2.6
RPGRIP1LQ68CZ1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.28■■■□□ 2.6
RPGRIP1LQ68CZ1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRIP1LQ68CZ1 CROCCP5-201ENST00000436658 830 ntBASIC31.26■■■□□ 2.6
RPGRIP1LQ68CZ1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.26■■■□□ 2.6
RPGRIP1LQ68CZ1 ESRRAP2-201ENST00000418437 1549 ntBASIC31.26■■■□□ 2.6
RPGRIP1LQ68CZ1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.26■■■□□ 2.6
RPGRIP1LQ68CZ1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
RPGRIP1LQ68CZ1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RPGRIP1LQ68CZ1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RPGRIP1LQ68CZ1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.26■■■□□ 2.59
RPGRIP1LQ68CZ1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC31.26■■■□□ 2.59
RPGRIP1LQ68CZ1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 MAP2K4P1-201ENST00000438453 1195 ntBASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RPGRIP1LQ68CZ1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.24■■■□□ 2.59
RPGRIP1LQ68CZ1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC31.24■■■□□ 2.59
RPGRIP1LQ68CZ1 AC011767.1-201ENST00000617410 1153 ntBASIC31.24■■■□□ 2.59
RPGRIP1LQ68CZ1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
RPGRIP1LQ68CZ1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RPGRIP1LQ68CZ1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC31.24■■■□□ 2.59
RPGRIP1LQ68CZ1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31.24■■■□□ 2.59
RPGRIP1LQ68CZ1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RPGRIP1LQ68CZ1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RPGRIP1LQ68CZ1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.23■■■□□ 2.59
RPGRIP1LQ68CZ1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.23■■■□□ 2.59
RPGRIP1LQ68CZ1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC31.23■■■□□ 2.59
RPGRIP1LQ68CZ1 AC104771.1-201ENST00000603335 964 ntBASIC31.23■■■□□ 2.59
RPGRIP1LQ68CZ1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
RPGRIP1LQ68CZ1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
RPGRIP1LQ68CZ1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC31.22■■■□□ 2.59
RPGRIP1LQ68CZ1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RPGRIP1LQ68CZ1 AC092068.2-201ENST00000590491 1708 ntBASIC31.22■■■□□ 2.59
RPGRIP1LQ68CZ1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
RPGRIP1LQ68CZ1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.22■■■□□ 2.59
RPGRIP1LQ68CZ1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC31.21■■■□□ 2.59
RPGRIP1LQ68CZ1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
RPGRIP1LQ68CZ1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RPGRIP1LQ68CZ1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
RPGRIP1LQ68CZ1 KRT87P-202ENST00000534226 1464 ntBASIC31.21■■■□□ 2.59
RPGRIP1LQ68CZ1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RPGRIP1LQ68CZ1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.21■■■□□ 2.59
RPGRIP1LQ68CZ1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.21■■■□□ 2.59
RPGRIP1LQ68CZ1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
RPGRIP1LQ68CZ1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
RPGRIP1LQ68CZ1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RPGRIP1LQ68CZ1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
RPGRIP1LQ68CZ1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RPGRIP1LQ68CZ1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RPGRIP1LQ68CZ1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
RPGRIP1LQ68CZ1 NCF1B-203ENST00000435988 1254 ntBASIC31.2■■■□□ 2.58
RPGRIP1LQ68CZ1 MDK-213ENST00000617138 635 ntTSL 2 BASIC31.2■■■□□ 2.58
RPGRIP1LQ68CZ1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RPGRIP1LQ68CZ1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC31.19■■■□□ 2.58
RPGRIP1LQ68CZ1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms