Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LPCAT4Q643R3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.55■□□□□ 0.88
LPCAT4Q643R3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LPCAT4Q643R3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LPCAT4Q643R3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LPCAT4Q643R3 AL592295.1-201ENST00000400984 884 ntBASIC20.54■□□□□ 0.88
LPCAT4Q643R3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LPCAT4Q643R3 AC007029.1-201ENST00000604183 313 ntBASIC20.54■□□□□ 0.88
LPCAT4Q643R3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LPCAT4Q643R3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LPCAT4Q643R3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LPCAT4Q643R3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.54■□□□□ 0.88
LPCAT4Q643R3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LPCAT4Q643R3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LPCAT4Q643R3 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.53■□□□□ 0.88
LPCAT4Q643R3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LPCAT4Q643R3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.52■□□□□ 0.87
LPCAT4Q643R3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LPCAT4Q643R3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LPCAT4Q643R3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LPCAT4Q643R3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LPCAT4Q643R3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LPCAT4Q643R3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.51■□□□□ 0.87
LPCAT4Q643R3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.5■□□□□ 0.87
LPCAT4Q643R3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
LPCAT4Q643R3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LPCAT4Q643R3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LPCAT4Q643R3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LPCAT4Q643R3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LPCAT4Q643R3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LPCAT4Q643R3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 RPS2P7-201ENST00000447334 885 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms