Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
RFX7Q2KHR2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
RFX7Q2KHR2 AC087742.1-201ENST00000575880 1738 ntBASIC26.57■■□□□ 1.84
RFX7Q2KHR2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFX7Q2KHR2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFX7Q2KHR2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFX7Q2KHR2 KRT18P5-201ENST00000436075 1291 ntBASIC26.57■■□□□ 1.84
RFX7Q2KHR2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.57■■□□□ 1.84
RFX7Q2KHR2 MIR6084-201ENST00000622012 110 ntBASIC26.57■■□□□ 1.84
RFX7Q2KHR2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.56■■□□□ 1.84
RFX7Q2KHR2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.55■■□□□ 1.84
RFX7Q2KHR2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 AC123595.1-201ENST00000440769 1046 ntBASIC26.54■■□□□ 1.84
RFX7Q2KHR2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 AL354811.1-201ENST00000610286 706 ntBASIC26.54■■□□□ 1.84
RFX7Q2KHR2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
RFX7Q2KHR2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFX7Q2KHR2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFX7Q2KHR2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RFX7Q2KHR2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RFX7Q2KHR2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.52■■□□□ 1.84
RFX7Q2KHR2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.84
RFX7Q2KHR2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RFX7Q2KHR2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFX7Q2KHR2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFX7Q2KHR2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFX7Q2KHR2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.51■■□□□ 1.83
RFX7Q2KHR2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RFX7Q2KHR2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.51■■□□□ 1.83
RFX7Q2KHR2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
RFX7Q2KHR2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.51■■□□□ 1.83
RFX7Q2KHR2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RFX7Q2KHR2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
RFX7Q2KHR2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.5■■□□□ 1.83
RFX7Q2KHR2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.5■■□□□ 1.83
RFX7Q2KHR2 AP005435.1-201ENST00000529293 1178 ntBASIC26.5■■□□□ 1.83
RFX7Q2KHR2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.5■■□□□ 1.83
RFX7Q2KHR2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.5■■□□□ 1.83
RFX7Q2KHR2 AC068587.7-201ENST00000641602 218 ntBASIC26.5■■□□□ 1.83
RFX7Q2KHR2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.5■■□□□ 1.83
RFX7Q2KHR2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.5■■□□□ 1.83
RFX7Q2KHR2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
RFX7Q2KHR2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 AC092437.1-201ENST00000624794 1048 ntBASIC26.49■■□□□ 1.83
RFX7Q2KHR2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.49■■□□□ 1.83
RFX7Q2KHR2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RFX7Q2KHR2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RFX7Q2KHR2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
RFX7Q2KHR2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RFX7Q2KHR2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RFX7Q2KHR2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms