Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RSPO4Q2I0M5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RSPO4Q2I0M5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RSPO4Q2I0M5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.36■■□□□ 1.01
RSPO4Q2I0M5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RSPO4Q2I0M5 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.36■■□□□ 1.01
RSPO4Q2I0M5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RSPO4Q2I0M5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RSPO4Q2I0M5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 AC073912.3-201ENST00000624414 853 ntBASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RSPO4Q2I0M5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 AC010501.1-201ENST00000606270 1962 ntBASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 MKRN4P-201ENST00000444706 1521 ntBASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RSPO4Q2I0M5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 KRT87P-202ENST00000534226 1464 ntBASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RSPO4Q2I0M5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RSPO4Q2I0M5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RSPO4Q2I0M5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
RSPO4Q2I0M5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RSPO4Q2I0M5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.32■■□□□ 1
RSPO4Q2I0M5 AC211429.1-201ENST00000415277 523 ntBASIC21.32■■□□□ 1
RSPO4Q2I0M5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.32■■□□□ 1
RSPO4Q2I0M5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RSPO4Q2I0M5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.32■■□□□ 1
RSPO4Q2I0M5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
RSPO4Q2I0M5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.32■■□□□ 1
RSPO4Q2I0M5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.32■■□□□ 1
RSPO4Q2I0M5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RSPO4Q2I0M5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RSPO4Q2I0M5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RSPO4Q2I0M5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RSPO4Q2I0M5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.31■■□□□ 1
RSPO4Q2I0M5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.31■■□□□ 1
RSPO4Q2I0M5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.31■■□□□ 1
RSPO4Q2I0M5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.31■■□□□ 1
RSPO4Q2I0M5 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.31■■□□□ 1
RSPO4Q2I0M5 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.31■■□□□ 1
RSPO4Q2I0M5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.31■■□□□ 1
RSPO4Q2I0M5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.31■■□□□ 1
RSPO4Q2I0M5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RSPO4Q2I0M5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.31■■□□□ 1
RSPO4Q2I0M5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
RSPO4Q2I0M5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
RSPO4Q2I0M5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.3■■□□□ 1
RSPO4Q2I0M5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RSPO4Q2I0M5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.3■■□□□ 1
RSPO4Q2I0M5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
RSPO4Q2I0M5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.3■■□□□ 1
RSPO4Q2I0M5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.3■■□□□ 1
RSPO4Q2I0M5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.3■■□□□ 1
RSPO4Q2I0M5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms