Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH1Q08174 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH1Q08174 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDH1Q08174 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH1Q08174 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH1Q08174 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.06■□□□□ 0.96
PCDH1Q08174 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH1Q08174 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH1Q08174 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDH1Q08174 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH1Q08174 SYT6-210ENST00000641643 1587 ntBASIC21.06■□□□□ 0.96
PCDH1Q08174 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDH1Q08174 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PCDH1Q08174 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH1Q08174 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDH1Q08174 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH1Q08174 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH1Q08174 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDH1Q08174 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH1Q08174 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDH1Q08174 AC136469.2-201ENST00000623944 1028 ntBASIC21.05■□□□□ 0.96
PCDH1Q08174 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDH1Q08174 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDH1Q08174 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH1Q08174 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH1Q08174 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH1Q08174 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH1Q08174 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDH1Q08174 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH1Q08174 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
PCDH1Q08174 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH1Q08174 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH1Q08174 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH1Q08174 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH1Q08174 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDH1Q08174 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH1Q08174 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH1Q08174 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH1Q08174 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH1Q08174 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDH1Q08174 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH1Q08174 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH1Q08174 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH1Q08174 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH1Q08174 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH1Q08174 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH1Q08174 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH1Q08174 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH1Q08174 AC131212.1-201ENST00000613771 668 ntBASIC21.03■□□□□ 0.96
PCDH1Q08174 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH1Q08174 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH1Q08174 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH1Q08174 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH1Q08174 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH1Q08174 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH1Q08174 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDH1Q08174 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDH1Q08174 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH1Q08174 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH1Q08174 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH1Q08174 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH1Q08174 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDH1Q08174 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH1Q08174 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH1Q08174 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH1Q08174 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH1Q08174 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH1Q08174 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH1Q08174 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH1Q08174 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH1Q08174 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH1Q08174 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH1Q08174 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH1Q08174 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH1Q08174 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH1Q08174 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH1Q08174 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH1Q08174 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH1Q08174 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH1Q08174 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH1Q08174 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21■□□□□ 0.95
PCDH1Q08174 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 AC079089.2-201ENST00000531211 1277 ntBASIC21■□□□□ 0.95
PCDH1Q08174 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PCDH1Q08174 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PCDH1Q08174 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PCDH1Q08174 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH1Q08174 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH1Q08174 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH1Q08174 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms