Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 CDC8YJR057W 651 nt4.37□□□□□ -1.71
HRD3Q05787 YLL037WYLL037W 381 nt4.37□□□□□ -1.71
HRD3Q05787 RFU1YLR073C 603 nt4.37□□□□□ -1.71
HRD3Q05787 YLR407WYLR407W 687 nt4.37□□□□□ -1.71
HRD3Q05787 HLJ1YMR161W 675 nt4.37□□□□□ -1.71
HRD3Q05787 DIM1YPL266W 957 nt4.37□□□□□ -1.71
HRD3Q05787 YBR126W-AYBR126W-A 207 nt4.37□□□□□ -1.71
HRD3Q05787 ICS2YBR157C 768 nt4.37□□□□□ -1.71
HRD3Q05787 KTR6YPL053C 1341 nt4.37□□□□□ -1.71
HRD3Q05787 MSA1YOR066W 1890 nt4.37□□□□□ -1.71
HRD3Q05787 STP4YDL048C 1473 nt4.37□□□□□ -1.71
HRD3Q05787 RPN4YDL020C 1596 nt4.36□□□□□ -1.71
HRD3Q05787 YFL040WYFL040W 1623 nt4.36□□□□□ -1.71
HRD3Q05787 PEX29YDR479C 1665 nt4.36□□□□□ -1.71
HRD3Q05787 YDL124WYDL124W 939 nt4.36□□□□□ -1.71
HRD3Q05787 TRM8YDL201W 861 nt4.36□□□□□ -1.71
HRD3Q05787 BUD25YER014C-A 462 nt4.36□□□□□ -1.71
HRD3Q05787 SPT15YER148W 723 nt4.36□□□□□ -1.71
HRD3Q05787 YIL025CYIL025C 375 nt4.36□□□□□ -1.71
HRD3Q05787 RCN1YKL159C 636 nt4.36□□□□□ -1.71
HRD3Q05787 PRX1YBL064C 786 nt4.36□□□□□ -1.71
HRD3Q05787 CCL1YPR025C 1182 nt4.36□□□□□ -1.71
HRD3Q05787 snR44snR44 211 nt4.36□□□□□ -1.71
HRD3Q05787 COM2YER130C 1332 nt4.36□□□□□ -1.71
HRD3Q05787 RTK1YDL025C 1863 nt4.36□□□□□ -1.71
HRD3Q05787 SPO1YNL012W 1896 nt4.36□□□□□ -1.71
HRD3Q05787 RAD52YML032C 1416 nt4.36□□□□□ -1.71
HRD3Q05787 BLM10YFL007W 6432 nt4.35□□□□□ -1.71
HRD3Q05787 PCA1YBR295W 3651 nt4.35□□□□□ -1.71
HRD3Q05787 NPY1YGL067W 1155 nt4.35□□□□□ -1.71
HRD3Q05787 GPP1YIL053W 753 nt4.35□□□□□ -1.71
HRD3Q05787 TVP38YKR088C 1014 nt4.35□□□□□ -1.71
HRD3Q05787 CDC42YLR229C 576 nt4.35□□□□□ -1.71
HRD3Q05787 YIM1YMR152W 1098 nt4.35□□□□□ -1.71
HRD3Q05787 YOR131CYOR131C 657 nt4.35□□□□□ -1.71
HRD3Q05787 MCT1YOR221C 1083 nt4.35□□□□□ -1.71
HRD3Q05787 HSP82YPL240C 2130 nt4.35□□□□□ -1.71
HRD3Q05787 TRM11YOL124C 1302 nt4.35□□□□□ -1.71
HRD3Q05787 MEK1YOR351C 1494 nt4.35□□□□□ -1.71
HRD3Q05787 SPS2YDR522C 1509 nt4.35□□□□□ -1.71
HRD3Q05787 YBR139WYBR139W 1527 nt4.35□□□□□ -1.71
HRD3Q05787 ABF1YKL112W 2196 nt4.34□□□□□ -1.71
HRD3Q05787 NUP2YLR335W 2163 nt4.34□□□□□ -1.71
HRD3Q05787 BUD13YGL174W 801 nt4.34□□□□□ -1.71
HRD3Q05787 ZRT1YGL255W 1131 nt4.34□□□□□ -1.71
HRD3Q05787 BET1YIL004C 429 nt4.34□□□□□ -1.71
HRD3Q05787 YIL163CYIL163C 354 nt4.34□□□□□ -1.71
HRD3Q05787 VPS25YJR102C 609 nt4.34□□□□□ -1.71
HRD3Q05787 YLR339CYLR339C 552 nt4.34□□□□□ -1.71
HRD3Q05787 NBP1YLR457C 960 nt4.34□□□□□ -1.71
HRD3Q05787 COG5YNL051W 1212 nt4.34□□□□□ -1.71
HRD3Q05787 CUS2YNL286W 858 nt4.34□□□□□ -1.71
HRD3Q05787 YBR056W-AYBR056W-A 201 nt4.34□□□□□ -1.71
HRD3Q05787 SHE9YDR393W 1371 nt4.34□□□□□ -1.71
HRD3Q05787 PMS1YNL082W 2622 nt4.34□□□□□ -1.72
HRD3Q05787 FAA3YIL009W 2085 nt4.33□□□□□ -1.72
HRD3Q05787 MSK1YNL073W 1731 nt4.33□□□□□ -1.72
HRD3Q05787 YCL068CYCL068C 783 nt4.33□□□□□ -1.72
HRD3Q05787 SHU2YDR078C 672 nt4.33□□□□□ -1.72
HRD3Q05787 HSP42YDR171W 1128 nt4.33□□□□□ -1.72
HRD3Q05787 ISC10YER180C 804 nt4.33□□□□□ -1.72
HRD3Q05787 RPL22BYFL034C-A 369 nt4.33□□□□□ -1.72
HRD3Q05787 EFB1YAL003W 621 nt4.33□□□□□ -1.72
HRD3Q05787 YJL218WYJL218W 591 nt4.33□□□□□ -1.72
HRD3Q05787 TEF4YKL081W 1239 nt4.33□□□□□ -1.72
HRD3Q05787 MRPL3YMR024W 1173 nt4.33□□□□□ -1.72
HRD3Q05787 SUB1YMR039C 879 nt4.33□□□□□ -1.72
HRD3Q05787 YOR338WYOR338W 1092 nt4.33□□□□□ -1.72
HRD3Q05787 FLC1YPL221W 2382 nt4.33□□□□□ -1.72
HRD3Q05787 MET4YNL103W 2019 nt4.33□□□□□ -1.72
HRD3Q05787 ADP1YCR011C 3150 nt4.32□□□□□ -1.72
HRD3Q05787 ESF1YDR365C 1887 nt4.32□□□□□ -1.72
HRD3Q05787 KCC4YCL024W 3114 nt4.32□□□□□ -1.72
HRD3Q05787 GWT1YJL091C 1473 nt4.32□□□□□ -1.72
HRD3Q05787 YDL228CYDL228C 642 nt4.32□□□□□ -1.72
HRD3Q05787 YGL193CYGL193C 312 nt4.32□□□□□ -1.72
HRD3Q05787 RSM27YGR215W 333 nt4.32□□□□□ -1.72
HRD3Q05787 tQ(UUG)CtQ(UUG)C 72 nt4.32□□□□□ -1.72
HRD3Q05787 tQ(UUG)D1tQ(UUG)D1 72 nt4.32□□□□□ -1.72
HRD3Q05787 MIC26YGR235C 702 nt4.32□□□□□ -1.72
HRD3Q05787 tQ(UUG)D2tQ(UUG)D2 72 nt4.32□□□□□ -1.72
HRD3Q05787 tQ(UUG)D3tQ(UUG)D3 72 nt4.32□□□□□ -1.72
HRD3Q05787 tQ(UUG)E1tQ(UUG)E1 72 nt4.32□□□□□ -1.72
HRD3Q05787 tQ(UUG)HtQ(UUG)H 72 nt4.32□□□□□ -1.72
HRD3Q05787 tQ(UUG)LtQ(UUG)L 72 nt4.32□□□□□ -1.72
HRD3Q05787 YNL144W-AYNL144W-A 84 nt4.32□□□□□ -1.72
HRD3Q05787 SUA7YPR086W 1038 nt4.32□□□□□ -1.72
HRD3Q05787 LOA1YPR139C 903 nt4.32□□□□□ -1.72
HRD3Q05787 VHC1YBR235W 3363 nt4.32□□□□□ -1.72
HRD3Q05787 TDA3YHR009C 1572 nt4.31□□□□□ -1.72
HRD3Q05787 ALG2YGL065C 1512 nt4.31□□□□□ -1.72
HRD3Q05787 YDR261C-DYDR261C-D 4815 nt4.31□□□□□ -1.72
HRD3Q05787 SEG2YKL105C 3399 nt4.31□□□□□ -1.72
HRD3Q05787 VAC17YCL063W 1272 nt4.31□□□□□ -1.72
HRD3Q05787 ARC1YGL105W 1131 nt4.31□□□□□ -1.72
HRD3Q05787 YIL171WYIL171W 330 nt4.31□□□□□ -1.72
HRD3Q05787 FIP1YJR093C 984 nt4.31□□□□□ -1.72
HRD3Q05787 YKL162CYKL162C 1209 nt4.31□□□□□ -1.72
HRD3Q05787 ELO3YLR372W 1038 nt4.31□□□□□ -1.72
HRD3Q05787 YMR082CYMR082C 357 nt4.31□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms