Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 RPS13YDR064W 456 nt4.56□□□□□ -1.68
RKR1Q04781 TRS85YDR108W 2097 nt4.56□□□□□ -1.68
RKR1Q04781 SPT23YKL020C 3249 nt4.55□□□□□ -1.68
RKR1Q04781 PRX1YBL064C 786 nt4.55□□□□□ -1.68
RKR1Q04781 CHS2YBR038W 2892 nt4.55□□□□□ -1.68
RKR1Q04781 SIN3YOL004W 4611 nt4.54□□□□□ -1.68
RKR1Q04781 FAP7YDL166C 594 nt4.54□□□□□ -1.68
RKR1Q04781 CAX4YGR036C 720 nt4.54□□□□□ -1.68
RKR1Q04781 YMR294W-AYMR294W-A 360 nt4.54□□□□□ -1.68
RKR1Q04781 TUM1YOR251C 915 nt4.54□□□□□ -1.68
RKR1Q04781 GPI1YGR216C 1830 nt4.54□□□□□ -1.68
RKR1Q04781 CWH41YGL027C 2502 nt4.53□□□□□ -1.68
RKR1Q04781 YLR297WYLR297W 390 nt4.53□□□□□ -1.69
RKR1Q04781 YPL168WYPL168W 1293 nt4.53□□□□□ -1.69
RKR1Q04781 VPS36YLR417W 1701 nt4.52□□□□□ -1.69
RKR1Q04781 STE11YLR362W 2154 nt4.52□□□□□ -1.69
RKR1Q04781 RRN11YML043C 1524 nt4.52□□□□□ -1.69
RKR1Q04781 CAJ1YER048C 1176 nt4.52□□□□□ -1.69
RKR1Q04781 YHL005CYHL005C 393 nt4.52□□□□□ -1.69
RKR1Q04781 RAD33YML011C 534 nt4.52□□□□□ -1.69
RKR1Q04781 YOR338WYOR338W 1092 nt4.52□□□□□ -1.69
RKR1Q04781 CNL1YDR357C 369 nt4.51□□□□□ -1.69
RKR1Q04781 SAW1YAL027W 786 nt4.51□□□□□ -1.69
RKR1Q04781 ESF1YDR365C 1887 nt4.51□□□□□ -1.69
RKR1Q04781 TIF4632YGL049C 2745 nt4.51□□□□□ -1.69
RKR1Q04781 ITC1YGL133W 3795 nt4.51□□□□□ -1.69
RKR1Q04781 FRE7YOL152W 1863 nt4.5□□□□□ -1.69
RKR1Q04781 ATG18YFR021W 1503 nt4.5□□□□□ -1.69
RKR1Q04781 MIT1YEL007W 2001 nt4.5□□□□□ -1.69
RKR1Q04781 PRS5YOL061W 1491 nt4.5□□□□□ -1.69
RKR1Q04781 PMS1YNL082W 2622 nt4.49□□□□□ -1.69
RKR1Q04781 RNR2YJL026W 1200 nt4.49□□□□□ -1.69
RKR1Q04781 YPR050CYPR050C 414 nt4.49□□□□□ -1.69
RKR1Q04781 NNK1YKL171W 2787 nt4.49□□□□□ -1.69
RKR1Q04781 STE6YKL209C 3873 nt4.49□□□□□ -1.69
RKR1Q04781 ERG28YER044C 447 nt4.48□□□□□ -1.69
RKR1Q04781 YMR315WYMR315W 1050 nt4.48□□□□□ -1.69
RKR1Q04781 YPL150WYPL150W 2706 nt4.48□□□□□ -1.69
RKR1Q04781 MNL1YHR204W 2391 nt4.48□□□□□ -1.69
RKR1Q04781 PUG1YER185W 912 nt4.48□□□□□ -1.69
RKR1Q04781 DCV1YFR012W 609 nt4.48□□□□□ -1.69
RKR1Q04781 VPS17YOR132W 1656 nt4.47□□□□□ -1.69
RKR1Q04781 PEX18YHR160C 852 nt4.47□□□□□ -1.69
RKR1Q04781 CDC16YKL022C 2523 nt4.47□□□□□ -1.69
RKR1Q04781 YEL025CYEL025C 3567 nt4.47□□□□□ -1.69
RKR1Q04781 CIT3YPR001W 1461 nt4.46□□□□□ -1.69
RKR1Q04781 RAM1YDL090C 1296 nt4.46□□□□□ -1.7
RKR1Q04781 YAP5YIR018W 738 nt4.46□□□□□ -1.7
RKR1Q04781 ANB1YJR047C 474 nt4.46□□□□□ -1.7
RKR1Q04781 RPL23AYBL087C 414 nt4.46□□□□□ -1.7
RKR1Q04781 TMA108YIL137C 2841 nt4.45□□□□□ -1.7
RKR1Q04781 PEF1YGR058W 1008 nt4.45□□□□□ -1.7
RKR1Q04781 TRM44YPL030W 1704 nt4.45□□□□□ -1.7
RKR1Q04781 YGL140CYGL140C 3660 nt4.45□□□□□ -1.7
RKR1Q04781 PRR2YDL214C 2100 nt4.45□□□□□ -1.7
RKR1Q04781 SIZ1YDR409W 2715 nt4.45□□□□□ -1.7
RKR1Q04781 SMF1YOL122C 1728 nt4.45□□□□□ -1.7
RKR1Q04781 BUD5YCR038C 1929 nt4.44□□□□□ -1.7
RKR1Q04781 YLR374CYLR374C 390 nt4.44□□□□□ -1.7
RKR1Q04781 YPL039WYPL039W 951 nt4.44□□□□□ -1.7
RKR1Q04781 SNF3YDL194W 2655 nt4.44□□□□□ -1.7
RKR1Q04781 EMC1YCL045C 2283 nt4.44□□□□□ -1.7
RKR1Q04781 YFL051CYFL051C 483 nt4.44□□□□□ -1.7
RKR1Q04781 ICY1YMR195W 384 nt4.44□□□□□ -1.7
RKR1Q04781 CMD1YBR109C 444 nt4.44□□□□□ -1.7
RKR1Q04781 RNT1YMR239C 1416 nt4.43□□□□□ -1.7
RKR1Q04781 HEF3YNL014W 3135 nt4.43□□□□□ -1.7
RKR1Q04781 YDR186CYDR186C 2634 nt4.43□□□□□ -1.7
RKR1Q04781 AUS1YOR011W 4185 nt4.43□□□□□ -1.7
RKR1Q04781 YOL019WYOL019W 1656 nt4.42□□□□□ -1.7
RKR1Q04781 YDR222WYDR222W 1248 nt4.42□□□□□ -1.7
RKR1Q04781 JJJ1YNL227C 1773 nt4.42□□□□□ -1.7
RKR1Q04781 COM2YER130C 1332 nt4.42□□□□□ -1.7
RKR1Q04781 ATG27YJL178C 816 nt4.41□□□□□ -1.7
RKR1Q04781 AYT1YLL063C 1425 nt4.41□□□□□ -1.7
RKR1Q04781 TSC11YER093C 4293 nt4.4□□□□□ -1.7
RKR1Q04781 LAC1YKL008C 1257 nt4.4□□□□□ -1.7
RKR1Q04781 FMP41YNL168C 780 nt4.4□□□□□ -1.7
RKR1Q04781 SAC1YKL212W 1872 nt4.4□□□□□ -1.71
RKR1Q04781 FCF1YDR339C 570 nt4.4□□□□□ -1.71
RKR1Q04781 TOS8YGL096W 831 nt4.4□□□□□ -1.71
RKR1Q04781 MPC3YGR243W 441 nt4.4□□□□□ -1.71
RKR1Q04781 THP2YHR167W 786 nt4.4□□□□□ -1.71
RKR1Q04781 MNT4YNR059W 1743 nt4.39□□□□□ -1.71
RKR1Q04781 UBP15YMR304W 3693 nt4.39□□□□□ -1.71
RKR1Q04781 MPA43YNL249C 1629 nt4.39□□□□□ -1.71
RKR1Q04781 BCP1YDR361C 852 nt4.39□□□□□ -1.71
RKR1Q04781 YGR122WYGR122W 1209 nt4.39□□□□□ -1.71
RKR1Q04781 RAX2YLR084C 3663 nt4.39□□□□□ -1.71
RKR1Q04781 ARO1YDR127W 4767 nt4.39□□□□□ -1.71
RKR1Q04781 WSS1YHR134W 810 nt4.38□□□□□ -1.71
RKR1Q04781 SMA2YML066C 1110 nt4.38□□□□□ -1.71
RKR1Q04781 SAM37YMR060C 984 nt4.38□□□□□ -1.71
RKR1Q04781 FMP25YLR077W 1752 nt4.38□□□□□ -1.71
RKR1Q04781 MPC54YOR177C 1395 nt4.38□□□□□ -1.71
RKR1Q04781 ENA5YDR038C 3276 nt4.37□□□□□ -1.71
RKR1Q04781 URA2YJL130C 6645 nt4.37□□□□□ -1.71
RKR1Q04781 LNP1YHR192W 837 nt4.36□□□□□ -1.71
RKR1Q04781 DAL2YIR029W 1032 nt4.36□□□□□ -1.71
RKR1Q04781 YHR078WYHR078W 1659 nt4.36□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms