Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.31■□□□□ 0.84
RPS3AP61247 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.31■□□□□ 0.84
RPS3AP61247 AC092171.4-201ENST00000609130 632 ntBASIC20.31■□□□□ 0.84
RPS3AP61247 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.31■□□□□ 0.84
RPS3AP61247 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
RPS3AP61247 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.31■□□□□ 0.84
RPS3AP61247 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RPS3AP61247 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPS3AP61247 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.31■□□□□ 0.84
RPS3AP61247 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS3AP61247 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS3AP61247 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS3AP61247 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS3AP61247 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RPS3AP61247 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RPS3AP61247 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.3■□□□□ 0.84
RPS3AP61247 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RPS3AP61247 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.3■□□□□ 0.84
RPS3AP61247 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.3■□□□□ 0.84
RPS3AP61247 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RPS3AP61247 AC009102.2-201ENST00000606772 1639 ntBASIC20.3■□□□□ 0.84
RPS3AP61247 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS3AP61247 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RPS3AP61247 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.29■□□□□ 0.84
RPS3AP61247 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.29■□□□□ 0.84
RPS3AP61247 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.29■□□□□ 0.84
RPS3AP61247 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.29■□□□□ 0.84
RPS3AP61247 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.29■□□□□ 0.84
RPS3AP61247 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS3AP61247 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
RPS3AP61247 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.28■□□□□ 0.84
RPS3AP61247 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.28■□□□□ 0.84
RPS3AP61247 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.28■□□□□ 0.84
RPS3AP61247 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPS3AP61247 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
RPS3AP61247 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RPS3AP61247 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 DUX4L19-201ENST00000557448 1267 ntBASIC20.27■□□□□ 0.84
RPS3AP61247 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS3AP61247 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPS3AP61247 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.27■□□□□ 0.83
RPS3AP61247 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPS3AP61247 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
RPS3AP61247 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RPS3AP61247 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
RPS3AP61247 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.26■□□□□ 0.83
RPS3AP61247 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RPS3AP61247 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.26■□□□□ 0.83
RPS3AP61247 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.26■□□□□ 0.83
RPS3AP61247 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPS3AP61247 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS3AP61247 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RPS3AP61247 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS3AP61247 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
RPS3AP61247 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.25■□□□□ 0.83
RPS3AP61247 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.25■□□□□ 0.83
RPS3AP61247 AC241377.3-202ENST00000626088 1088 ntBASIC20.25■□□□□ 0.83
RPS3AP61247 AC241585.3-202ENST00000628937 1088 ntBASIC20.25■□□□□ 0.83
RPS3AP61247 AC245100.8-202ENST00000629247 1058 ntBASIC20.25■□□□□ 0.83
RPS3AP61247 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS3AP61247 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms