Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SPCS3P61009 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPCS3P61009 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.67■□□□□ 0.42
SPCS3P61009 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
SPCS3P61009 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.67■□□□□ 0.42
SPCS3P61009 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.67■□□□□ 0.42
SPCS3P61009 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SPCS3P61009 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.67■□□□□ 0.42
SPCS3P61009 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 AC005703.6-201ENST00000623265 1329 ntBASIC17.67■□□□□ 0.42
SPCS3P61009 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPCS3P61009 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SPCS3P61009 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPCS3P61009 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPCS3P61009 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPCS3P61009 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.66■□□□□ 0.42
SPCS3P61009 FBXW4P1-201ENST00000426721 2239 ntBASIC17.66■□□□□ 0.42
SPCS3P61009 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPCS3P61009 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SPCS3P61009 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPCS3P61009 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPCS3P61009 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPCS3P61009 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SPCS3P61009 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPCS3P61009 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPCS3P61009 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SPCS3P61009 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SPCS3P61009 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPCS3P61009 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.65■□□□□ 0.42
SPCS3P61009 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.65■□□□□ 0.42
SPCS3P61009 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.65■□□□□ 0.42
SPCS3P61009 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.65■□□□□ 0.42
SPCS3P61009 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.65■□□□□ 0.42
SPCS3P61009 AC137630.3-201ENST00000607245 391 ntBASIC17.65■□□□□ 0.42
SPCS3P61009 AC009086.3-201ENST00000623486 1008 ntBASIC17.65■□□□□ 0.42
SPCS3P61009 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SPCS3P61009 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPCS3P61009 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SPCS3P61009 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPCS3P61009 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPCS3P61009 MIR6722-201ENST00000617286 78 ntBASIC17.64■□□□□ 0.41
SPCS3P61009 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.64■□□□□ 0.41
SPCS3P61009 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SPCS3P61009 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SPCS3P61009 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPCS3P61009 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPCS3P61009 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPCS3P61009 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPCS3P61009 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.64■□□□□ 0.41
SPCS3P61009 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SPCS3P61009 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SPCS3P61009 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.63■□□□□ 0.41
SPCS3P61009 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.63■□□□□ 0.41
SPCS3P61009 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SPCS3P61009 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 YBX1P4-201ENST00000392794 808 ntBASIC17.63■□□□□ 0.41
SPCS3P61009 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.63■□□□□ 0.41
SPCS3P61009 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SPCS3P61009 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SPCS3P61009 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SPCS3P61009 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 LINC01960-201ENST00000563759 1884 ntBASIC17.63■□□□□ 0.41
SPCS3P61009 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPCS3P61009 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPCS3P61009 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.62■□□□□ 0.41
SPCS3P61009 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPCS3P61009 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SPCS3P61009 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPCS3P61009 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.62■□□□□ 0.41
SPCS3P61009 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.62■□□□□ 0.41
SPCS3P61009 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.62■□□□□ 0.41
SPCS3P61009 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPCS3P61009 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms