Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.71■■□□□ 1.39
CDR1P51861 AC010525.1-201ENST00000585559 441 ntBASIC23.71■■□□□ 1.39
CDR1P51861 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDR1P51861 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDR1P51861 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDR1P51861 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.7■■□□□ 1.39
CDR1P51861 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.7■■□□□ 1.39
CDR1P51861 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
CDR1P51861 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CDR1P51861 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.7■■□□□ 1.39
CDR1P51861 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDR1P51861 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CDR1P51861 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDR1P51861 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDR1P51861 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDR1P51861 SLC47A1P1-202ENST00000449666 945 ntBASIC23.7■■□□□ 1.38
CDR1P51861 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.7■■□□□ 1.38
CDR1P51861 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.7■■□□□ 1.38
CDR1P51861 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDR1P51861 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDR1P51861 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDR1P51861 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDR1P51861 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDR1P51861 AC144652.1-201ENST00000609974 1624 ntBASIC23.7■■□□□ 1.38
CDR1P51861 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.69■■□□□ 1.38
CDR1P51861 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CDR1P51861 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.69■■□□□ 1.38
CDR1P51861 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CDR1P51861 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDR1P51861 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDR1P51861 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.69■■□□□ 1.38
CDR1P51861 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.69■■□□□ 1.38
CDR1P51861 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.69■■□□□ 1.38
CDR1P51861 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDR1P51861 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDR1P51861 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CDR1P51861 AL138724.1-201ENST00000606771 1088 ntBASIC23.69■■□□□ 1.38
CDR1P51861 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.69■■□□□ 1.38
CDR1P51861 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDR1P51861 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.69■■□□□ 1.38
CDR1P51861 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.69■■□□□ 1.38
CDR1P51861 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDR1P51861 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CDR1P51861 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CDR1P51861 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDR1P51861 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CDR1P51861 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDR1P51861 AC091305.1-201ENST00000479476 895 ntBASIC23.68■■□□□ 1.38
CDR1P51861 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDR1P51861 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.68■■□□□ 1.38
CDR1P51861 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDR1P51861 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
CDR1P51861 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDR1P51861 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDR1P51861 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CDR1P51861 AC133637.1-201ENST00000624115 1537 ntBASIC23.68■■□□□ 1.38
CDR1P51861 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDR1P51861 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDR1P51861 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDR1P51861 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CDR1P51861 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CDR1P51861 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDR1P51861 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDR1P51861 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDR1P51861 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CDR1P51861 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDR1P51861 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.67■■□□□ 1.38
CDR1P51861 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.67■■□□□ 1.38
CDR1P51861 C9orf163-202ENST00000624034 2573 ntBASIC23.67■■□□□ 1.38
CDR1P51861 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
CDR1P51861 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDR1P51861 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
CDR1P51861 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDR1P51861 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CDR1P51861 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDR1P51861 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDR1P51861 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDR1P51861 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CDR1P51861 AC027682.1-201ENST00000562846 899 ntBASIC23.66■■□□□ 1.38
CDR1P51861 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDR1P51861 AL353803.4-201ENST00000565882 1934 ntBASIC23.66■■□□□ 1.38
CDR1P51861 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CDR1P51861 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDR1P51861 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDR1P51861 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CDR1P51861 RASA4CP-201ENST00000424092 1398 ntBASIC23.65■■□□□ 1.38
CDR1P51861 LINC01529-204ENST00000636474 1715 ntBASIC23.65■■□□□ 1.38
CDR1P51861 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.65■■□□□ 1.38
CDR1P51861 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.65■■□□□ 1.38
CDR1P51861 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.65■■□□□ 1.38
CDR1P51861 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.65■■□□□ 1.38
CDR1P51861 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.65■■□□□ 1.38
CDR1P51861 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.65■■□□□ 1.38
CDR1P51861 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDR1P51861 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.65■■□□□ 1.38
CDR1P51861 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CDR1P51861 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.65■■□□□ 1.38
CDR1P51861 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDR1P51861 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDR1P51861 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms