Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YOL019WYOL019W 1656 nt3.44□□□□□ -1.86
CDC40P40968 GYP6YJL044C 1377 nt3.44□□□□□ -1.86
CDC40P40968 GRX6YDL010W 696 nt3.44□□□□□ -1.86
CDC40P40968 OKP1YGR179C 1221 nt3.44□□□□□ -1.86
CDC40P40968 YIL025CYIL025C 375 nt3.44□□□□□ -1.86
CDC40P40968 YAL004WYAL004W 648 nt3.44□□□□□ -1.86
CDC40P40968 PEX22YAL055W 543 nt3.44□□□□□ -1.86
CDC40P40968 YAL056C-AYAL056C-A 351 nt3.44□□□□□ -1.86
CDC40P40968 NDJ1YOL104C 1059 nt3.44□□□□□ -1.86
CDC40P40968 SPS4YOR313C 1017 nt3.44□□□□□ -1.86
CDC40P40968 YKR015CYKR015C 1707 nt3.44□□□□□ -1.86
CDC40P40968 PDR12YPL058C 4536 nt3.43□□□□□ -1.86
CDC40P40968 YTM1YOR272W 1383 nt3.43□□□□□ -1.86
CDC40P40968 NSE3YDR288W 912 nt3.43□□□□□ -1.86
CDC40P40968 YDR391CYDR391C 699 nt3.43□□□□□ -1.86
CDC40P40968 JAC1YGL018C 555 nt3.43□□□□□ -1.86
CDC40P40968 EDC1YGL222C 528 nt3.43□□□□□ -1.86
CDC40P40968 YKE4YIL023C 1041 nt3.43□□□□□ -1.86
CDC40P40968 PET130YJL023C 1044 nt3.43□□□□□ -1.86
CDC40P40968 YAL069WYAL069W 315 nt3.43□□□□□ -1.86
CDC40P40968 YLR407WYLR407W 687 nt3.43□□□□□ -1.86
CDC40P40968 YPL088WYPL088W 1029 nt3.43□□□□□ -1.86
CDC40P40968 YBR242WYBR242W 717 nt3.43□□□□□ -1.86
CDC40P40968 NEM1YHR004C 1341 nt3.43□□□□□ -1.86
CDC40P40968 YAP1802YGR241C 1707 nt3.42□□□□□ -1.86
CDC40P40968 KAP95YLR347C 2586 nt3.42□□□□□ -1.86
CDC40P40968 snR63snR63 255 nt3.42□□□□□ -1.86
CDC40P40968 DPB4YDR121W 591 nt3.42□□□□□ -1.86
CDC40P40968 YDR161WYDR161W 1164 nt3.42□□□□□ -1.86
CDC40P40968 FCF1YDR339C 570 nt3.42□□□□□ -1.86
CDC40P40968 TRP4YDR354W 1143 nt3.42□□□□□ -1.86
CDC40P40968 YLR283WYLR283W 945 nt3.42□□□□□ -1.86
CDC40P40968 REH1YLR387C 1299 nt3.42□□□□□ -1.86
CDC40P40968 BLS1YLR408C 369 nt3.42□□□□□ -1.86
CDC40P40968 YBL094CYBL094C 333 nt3.42□□□□□ -1.86
CDC40P40968 PNT1YOR266W 1272 nt3.42□□□□□ -1.86
CDC40P40968 HSH49YOR319W 642 nt3.42□□□□□ -1.86
CDC40P40968 ECM8YBR076W 1065 nt3.42□□□□□ -1.86
CDC40P40968 DRN1YGR093W 1524 nt3.42□□□□□ -1.86
CDC40P40968 ARO9YHR137W 1542 nt3.42□□□□□ -1.86
CDC40P40968 BIK1YCL029C 1323 nt3.42□□□□□ -1.86
CDC40P40968 FMP25YLR077W 1752 nt3.41□□□□□ -1.86
CDC40P40968 WBP1YEL002C 1293 nt3.41□□□□□ -1.86
CDC40P40968 CAB2YIL083C 1098 nt3.41□□□□□ -1.86
CDC40P40968 RPC17YJL011C 486 nt3.41□□□□□ -1.86
CDC40P40968 COA3YJL062W-A 258 nt3.41□□□□□ -1.86
CDC40P40968 HRT3YLR097C 1035 nt3.41□□□□□ -1.86
CDC40P40968 VPS68YOL129W 555 nt3.41□□□□□ -1.86
CDC40P40968 YOR379CYOR379C 339 nt3.41□□□□□ -1.86
CDC40P40968 YDC1YPL087W 954 nt3.41□□□□□ -1.86
CDC40P40968 FES1YBR101C 873 nt3.41□□□□□ -1.86
CDC40P40968 snR34snR34 203 nt3.41□□□□□ -1.86
CDC40P40968 PMT6YGR199W 2280 nt3.4□□□□□ -1.86
CDC40P40968 TED1YIL039W 1422 nt3.4□□□□□ -1.87
CDC40P40968 YLR177WYLR177W 1887 nt3.4□□□□□ -1.87
CDC40P40968 MED11YMR112C 396 nt3.4□□□□□ -1.87
CDC40P40968 ASC1YMR116C 960 nt3.4□□□□□ -1.87
CDC40P40968 FSH3YOR280C 801 nt3.4□□□□□ -1.87
CDC40P40968 SPO19YPL130W 672 nt3.4□□□□□ -1.87
CDC40P40968 SCD6YPR129W 1050 nt3.4□□□□□ -1.87
CDC40P40968 RPO31YOR116C 4383 nt3.4□□□□□ -1.87
CDC40P40968 SRP72YPL210C 1923 nt3.4□□□□□ -1.87
CDC40P40968 BUD27YFL023W 2391 nt3.39□□□□□ -1.87
CDC40P40968 SDS23YGL056C 1584 nt3.39□□□□□ -1.87
CDC40P40968 PHO5YBR093C 1404 nt3.39□□□□□ -1.87
CDC40P40968 GLO4YOR040W 858 nt3.39□□□□□ -1.87
CDC40P40968 SPN1YPR133C 1233 nt3.39□□□□□ -1.87
CDC40P40968 RPB2YOR151C 3675 nt3.39□□□□□ -1.87
CDC40P40968 NOP8YOL144W 1455 nt3.39□□□□□ -1.87
CDC40P40968 PTA1YAL043C 2358 nt3.39□□□□□ -1.87
CDC40P40968 ABP140YOR239W 1887 nt3.39□□□□□ -1.87
CDC40P40968 RSM23YGL129C 1353 nt3.38□□□□□ -1.87
CDC40P40968 YIG1YPL201C 1386 nt3.38□□□□□ -1.87
CDC40P40968 ACE2YLR131C 2313 nt3.38□□□□□ -1.87
CDC40P40968 MIC60YKR016W 1623 nt3.38□□□□□ -1.87
CDC40P40968 AEP3YPL005W 1821 nt3.38□□□□□ -1.87
CDC40P40968 HDA2YDR295C 2025 nt3.38□□□□□ -1.87
CDC40P40968 YCL076WYCL076W 744 nt3.38□□□□□ -1.87
CDC40P40968 RPC53YDL150W 1269 nt3.38□□□□□ -1.87
CDC40P40968 PDS1YDR113C 1122 nt3.38□□□□□ -1.87
CDC40P40968 YGR026WYGR026W 837 nt3.38□□□□□ -1.87
CDC40P40968 MRPS35YGR165W 1038 nt3.38□□□□□ -1.87
CDC40P40968 YJR111CYJR111C 852 nt3.38□□□□□ -1.87
CDC40P40968 RRG9YNL213C 645 nt3.38□□□□□ -1.87
CDC40P40968 AIF1YNR074C 1137 nt3.38□□□□□ -1.87
CDC40P40968 MLH2YLR035C 2088 nt3.38□□□□□ -1.87
CDC40P40968 KTR6YPL053C 1341 nt3.38□□□□□ -1.87
CDC40P40968 GDH2YDL215C 3279 nt3.38□□□□□ -1.87
CDC40P40968 YGL140CYGL140C 3660 nt3.37□□□□□ -1.87
CDC40P40968 YDL094CYDL094C 510 nt3.37□□□□□ -1.87
CDC40P40968 ERJ5YFR041C 888 nt3.37□□□□□ -1.87
CDC40P40968 IRC25YLR021W 540 nt3.37□□□□□ -1.87
CDC40P40968 APS1YLR170C 471 nt3.37□□□□□ -1.87
CDC40P40968 SEC72YLR292C 582 nt3.37□□□□□ -1.87
CDC40P40968 UTP23YOR004W 765 nt3.37□□□□□ -1.87
CDC40P40968 YBR016WYBR016W 387 nt3.37□□□□□ -1.87
CDC40P40968 RFM1YOR279C 933 nt3.37□□□□□ -1.87
CDC40P40968 YBR096WYBR096W 693 nt3.37□□□□□ -1.87
CDC40P40968 XRN1YGL173C 4587 nt3.37□□□□□ -1.87
CDC40P40968 SWI1YPL016W 3945 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 23.5 ms