Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.94■□□□□ 0.62
GDNFP39905 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.94■□□□□ 0.62
GDNFP39905 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDNFP39905 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
GDNFP39905 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDNFP39905 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GDNFP39905 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.94■□□□□ 0.62
GDNFP39905 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.94■□□□□ 0.62
GDNFP39905 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GDNFP39905 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDNFP39905 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
GDNFP39905 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDNFP39905 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDNFP39905 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GDNFP39905 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.93■□□□□ 0.62
GDNFP39905 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.93■□□□□ 0.62
GDNFP39905 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDNFP39905 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GDNFP39905 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.93■□□□□ 0.62
GDNFP39905 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GDNFP39905 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GDNFP39905 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GDNFP39905 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDNFP39905 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GDNFP39905 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDNFP39905 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDNFP39905 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.92■□□□□ 0.62
GDNFP39905 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.92■□□□□ 0.62
GDNFP39905 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.92■□□□□ 0.62
GDNFP39905 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
GDNFP39905 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.92■□□□□ 0.62
GDNFP39905 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDNFP39905 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDNFP39905 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.92■□□□□ 0.62
GDNFP39905 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDNFP39905 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.92■□□□□ 0.62
GDNFP39905 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDNFP39905 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GDNFP39905 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.91■□□□□ 0.62
GDNFP39905 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GDNFP39905 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDNFP39905 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDNFP39905 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.91■□□□□ 0.62
GDNFP39905 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.91■□□□□ 0.62
GDNFP39905 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
GDNFP39905 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.91■□□□□ 0.62
GDNFP39905 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GDNFP39905 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDNFP39905 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GDNFP39905 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDNFP39905 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.9■□□□□ 0.62
GDNFP39905 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDNFP39905 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
GDNFP39905 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDNFP39905 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDNFP39905 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDNFP39905 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.9■□□□□ 0.62
GDNFP39905 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.9■□□□□ 0.62
GDNFP39905 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GDNFP39905 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.9■□□□□ 0.62
GDNFP39905 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
GDNFP39905 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GDNFP39905 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.9■□□□□ 0.62
GDNFP39905 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDNFP39905 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GDNFP39905 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GDNFP39905 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GDNFP39905 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.89■□□□□ 0.62
GDNFP39905 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDNFP39905 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDNFP39905 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GDNFP39905 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.89■□□□□ 0.61
GDNFP39905 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.89■□□□□ 0.61
GDNFP39905 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GDNFP39905 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDNFP39905 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDNFP39905 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.89■□□□□ 0.61
GDNFP39905 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.89■□□□□ 0.61
GDNFP39905 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDNFP39905 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDNFP39905 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
GDNFP39905 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDNFP39905 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.89■□□□□ 0.61
GDNFP39905 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.88■□□□□ 0.61
GDNFP39905 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.88■□□□□ 0.61
GDNFP39905 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDNFP39905 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDNFP39905 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms