Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.65■□□□□ 0.9
KRT20P35900 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
KRT20P35900 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT20P35900 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT20P35900 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT20P35900 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT20P35900 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
KRT20P35900 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
KRT20P35900 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT20P35900 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT20P35900 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT20P35900 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT20P35900 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.64■□□□□ 0.89
KRT20P35900 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT20P35900 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT20P35900 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT20P35900 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT20P35900 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT20P35900 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
KRT20P35900 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT20P35900 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
KRT20P35900 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT20P35900 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT20P35900 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT20P35900 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT20P35900 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT20P35900 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT20P35900 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT20P35900 AL136116.3-201ENST00000402907 1138 ntBASIC20.63■□□□□ 0.89
KRT20P35900 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT20P35900 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KRT20P35900 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.63■□□□□ 0.89
KRT20P35900 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT20P35900 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT20P35900 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT20P35900 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT20P35900 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KRT20P35900 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
KRT20P35900 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT20P35900 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT20P35900 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT20P35900 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
KRT20P35900 AC009086.3-201ENST00000623486 1008 ntBASIC20.62■□□□□ 0.89
KRT20P35900 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT20P35900 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT20P35900 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KRT20P35900 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT20P35900 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT20P35900 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT20P35900 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT20P35900 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT20P35900 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT20P35900 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT20P35900 AC242852.2-201ENST00000615738 1807 ntBASIC20.61■□□□□ 0.89
KRT20P35900 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
KRT20P35900 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KRT20P35900 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT20P35900 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
KRT20P35900 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT20P35900 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT20P35900 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT20P35900 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT20P35900 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT20P35900 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT20P35900 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT20P35900 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT20P35900 MIR4466-201ENST00000606121 54 ntBASIC20.6■□□□□ 0.89
KRT20P35900 AL353803.4-201ENST00000565882 1934 ntBASIC20.6■□□□□ 0.89
KRT20P35900 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT20P35900 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT20P35900 AL137060.1-201ENST00000618151 2648 ntBASIC20.59■□□□□ 0.89
KRT20P35900 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT20P35900 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT20P35900 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT20P35900 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KRT20P35900 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT20P35900 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT20P35900 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT20P35900 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT20P35900 DUX4L4-201ENST00000566884 1269 ntBASIC20.59■□□□□ 0.89
KRT20P35900 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT20P35900 AC099791.2-201ENST00000605725 427 ntBASIC20.59■□□□□ 0.89
KRT20P35900 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KRT20P35900 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT20P35900 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT20P35900 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.58■□□□□ 0.89
KRT20P35900 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT20P35900 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT20P35900 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRT20P35900 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.58■□□□□ 0.88
KRT20P35900 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT20P35900 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT20P35900 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT20P35900 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KRT20P35900 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
KRT20P35900 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT20P35900 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT20P35900 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT20P35900 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT20P35900 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms