Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA3P29320 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
EPHA3P29320 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
EPHA3P29320 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
EPHA3P29320 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA3P29320 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA3P29320 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA3P29320 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA3P29320 DUX4L4-201ENST00000566884 1269 ntBASIC21.2■□□□□ 0.98
EPHA3P29320 AC137630.3-201ENST00000607245 391 ntBASIC21.2■□□□□ 0.98
EPHA3P29320 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.2■□□□□ 0.98
EPHA3P29320 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA3P29320 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.2■□□□□ 0.98
EPHA3P29320 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA3P29320 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
EPHA3P29320 KRT8P33-201ENST00000508125 1423 ntBASIC21.2■□□□□ 0.98
EPHA3P29320 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.19■□□□□ 0.98
EPHA3P29320 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
EPHA3P29320 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
EPHA3P29320 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
EPHA3P29320 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.19■□□□□ 0.98
EPHA3P29320 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
EPHA3P29320 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.19■□□□□ 0.98
EPHA3P29320 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.19■□□□□ 0.98
EPHA3P29320 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA3P29320 AC004687.1-201ENST00000579003 1625 ntBASIC21.18■□□□□ 0.98
EPHA3P29320 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
EPHA3P29320 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.18■□□□□ 0.98
EPHA3P29320 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
EPHA3P29320 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.18■□□□□ 0.98
EPHA3P29320 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.18■□□□□ 0.98
EPHA3P29320 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.18■□□□□ 0.98
EPHA3P29320 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.18■□□□□ 0.98
EPHA3P29320 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.18■□□□□ 0.98
EPHA3P29320 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.18■□□□□ 0.98
EPHA3P29320 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA3P29320 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.18■□□□□ 0.98
EPHA3P29320 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.18■□□□□ 0.98
EPHA3P29320 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA3P29320 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA3P29320 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA3P29320 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA3P29320 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA3P29320 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA3P29320 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA3P29320 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.17■□□□□ 0.98
EPHA3P29320 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.17■□□□□ 0.98
EPHA3P29320 MIR6722-201ENST00000617286 78 ntBASIC21.17■□□□□ 0.98
EPHA3P29320 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.17■□□□□ 0.98
EPHA3P29320 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA3P29320 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA3P29320 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
EPHA3P29320 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
EPHA3P29320 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
EPHA3P29320 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.16■□□□□ 0.98
EPHA3P29320 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.16■□□□□ 0.98
EPHA3P29320 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.16■□□□□ 0.98
EPHA3P29320 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.16■□□□□ 0.98
EPHA3P29320 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA3P29320 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA3P29320 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
EPHA3P29320 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA3P29320 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
EPHA3P29320 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHA3P29320 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHA3P29320 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA3P29320 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHA3P29320 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms