Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.05■■□□□ 1.28
MMP8P22894 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.05■■□□□ 1.28
MMP8P22894 AC010525.1-201ENST00000585559 441 ntBASIC23.05■■□□□ 1.28
MMP8P22894 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.05■■□□□ 1.28
MMP8P22894 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.05■■□□□ 1.28
MMP8P22894 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
MMP8P22894 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.05■■□□□ 1.28
MMP8P22894 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.05■■□□□ 1.28
MMP8P22894 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MMP8P22894 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
MMP8P22894 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
MMP8P22894 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
MMP8P22894 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
MMP8P22894 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MMP8P22894 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
MMP8P22894 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MMP8P22894 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.04■■□□□ 1.28
MMP8P22894 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MMP8P22894 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MMP8P22894 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MMP8P22894 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.04■■□□□ 1.28
MMP8P22894 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MMP8P22894 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MMP8P22894 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MMP8P22894 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
MMP8P22894 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.04■■□□□ 1.28
MMP8P22894 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MMP8P22894 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MMP8P22894 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
MMP8P22894 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.03■■□□□ 1.28
MMP8P22894 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
MMP8P22894 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MMP8P22894 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.03■■□□□ 1.28
MMP8P22894 AC068587.7-201ENST00000641602 218 ntBASIC23.03■■□□□ 1.28
MMP8P22894 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MMP8P22894 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MMP8P22894 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MMP8P22894 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
MMP8P22894 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MMP8P22894 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MMP8P22894 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MMP8P22894 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.02■■□□□ 1.28
MMP8P22894 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MMP8P22894 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MMP8P22894 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
MMP8P22894 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.02■■□□□ 1.28
MMP8P22894 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MMP8P22894 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
MMP8P22894 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MMP8P22894 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.02■■□□□ 1.28
MMP8P22894 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MMP8P22894 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.02■■□□□ 1.28
MMP8P22894 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.02■■□□□ 1.28
MMP8P22894 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MMP8P22894 AC008406.3-201ENST00000620001 1374 ntBASIC23.01■■□□□ 1.27
MMP8P22894 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
MMP8P22894 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
MMP8P22894 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MMP8P22894 UNC93B3-201ENST00000308076 687 ntBASIC23.01■■□□□ 1.27
MMP8P22894 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.01■■□□□ 1.27
MMP8P22894 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
MMP8P22894 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.01■■□□□ 1.27
MMP8P22894 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.01■■□□□ 1.27
MMP8P22894 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.01■■□□□ 1.27
MMP8P22894 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
MMP8P22894 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
MMP8P22894 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
MMP8P22894 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
MMP8P22894 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
MMP8P22894 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23■■□□□ 1.27
MMP8P22894 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23■■□□□ 1.27
MMP8P22894 LINC00565-201ENST00000562710 2331 ntBASIC23■■□□□ 1.27
MMP8P22894 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23■■□□□ 1.27
MMP8P22894 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23■■□□□ 1.27
MMP8P22894 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
MMP8P22894 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.99■■□□□ 1.27
MMP8P22894 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
MMP8P22894 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
MMP8P22894 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.99■■□□□ 1.27
MMP8P22894 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.99■■□□□ 1.27
MMP8P22894 SLC47A1P1-202ENST00000449666 945 ntBASIC22.99■■□□□ 1.27
MMP8P22894 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
MMP8P22894 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
MMP8P22894 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
MMP8P22894 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MMP8P22894 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
MMP8P22894 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MMP8P22894 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MMP8P22894 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.98■■□□□ 1.27
MMP8P22894 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MMP8P22894 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms