Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CTLA4P16410 CLDN5-201ENST00000403084 2357 ntBASIC19.41■□□□□ 0.7
CTLA4P16410 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
CTLA4P16410 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTLA4P16410 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.4■□□□□ 0.7
CTLA4P16410 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTLA4P16410 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.4■□□□□ 0.7
CTLA4P16410 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.4■□□□□ 0.7
CTLA4P16410 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.4■□□□□ 0.7
CTLA4P16410 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.4■□□□□ 0.7
CTLA4P16410 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTLA4P16410 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.4■□□□□ 0.7
CTLA4P16410 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTLA4P16410 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CTLA4P16410 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTLA4P16410 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTLA4P16410 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.39■□□□□ 0.69
CTLA4P16410 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTLA4P16410 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.39■□□□□ 0.69
CTLA4P16410 SRD5A1P1-201ENST00000442297 786 ntBASIC19.39■□□□□ 0.69
CTLA4P16410 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTLA4P16410 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.39■□□□□ 0.69
CTLA4P16410 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTLA4P16410 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CTLA4P16410 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTLA4P16410 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTLA4P16410 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTLA4P16410 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.38■□□□□ 0.69
CTLA4P16410 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTLA4P16410 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTLA4P16410 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.37■□□□□ 0.69
CTLA4P16410 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTLA4P16410 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTLA4P16410 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.37■□□□□ 0.69
CTLA4P16410 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CTLA4P16410 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTLA4P16410 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTLA4P16410 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTLA4P16410 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.37■□□□□ 0.69
CTLA4P16410 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.37■□□□□ 0.69
CTLA4P16410 MIR3181-201ENST00000578512 73 ntBASIC19.37■□□□□ 0.69
CTLA4P16410 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.37■□□□□ 0.69
CTLA4P16410 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.37■□□□□ 0.69
CTLA4P16410 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.37■□□□□ 0.69
CTLA4P16410 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.37■□□□□ 0.69
CTLA4P16410 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTLA4P16410 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTLA4P16410 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
CTLA4P16410 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CTLA4P16410 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTLA4P16410 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.37■□□□□ 0.69
CTLA4P16410 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTLA4P16410 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTLA4P16410 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTLA4P16410 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.36■□□□□ 0.69
CTLA4P16410 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTLA4P16410 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTLA4P16410 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.36■□□□□ 0.69
CTLA4P16410 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTLA4P16410 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTLA4P16410 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.36■□□□□ 0.69
CTLA4P16410 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.36■□□□□ 0.69
CTLA4P16410 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTLA4P16410 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTLA4P16410 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTLA4P16410 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTLA4P16410 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.35■□□□□ 0.69
CTLA4P16410 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTLA4P16410 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTLA4P16410 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.35■□□□□ 0.69
CTLA4P16410 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.35■□□□□ 0.69
CTLA4P16410 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.35■□□□□ 0.69
CTLA4P16410 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CTLA4P16410 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.35■□□□□ 0.69
CTLA4P16410 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTLA4P16410 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTLA4P16410 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.35■□□□□ 0.69
CTLA4P16410 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CTLA4P16410 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.34■□□□□ 0.69
CTLA4P16410 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTLA4P16410 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTLA4P16410 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTLA4P16410 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTLA4P16410 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTLA4P16410 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTLA4P16410 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTLA4P16410 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTLA4P16410 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.34■□□□□ 0.69
CTLA4P16410 AL031602.1-201ENST00000633169 911 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms