Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.59■□□□□ 0.89
NCK1P16333 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.59■□□□□ 0.89
NCK1P16333 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCK1P16333 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.59■□□□□ 0.89
NCK1P16333 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCK1P16333 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCK1P16333 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.59■□□□□ 0.89
NCK1P16333 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCK1P16333 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NCK1P16333 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCK1P16333 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.58■□□□□ 0.89
NCK1P16333 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.58■□□□□ 0.89
NCK1P16333 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.58■□□□□ 0.89
NCK1P16333 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCK1P16333 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCK1P16333 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
NCK1P16333 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCK1P16333 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NCK1P16333 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCK1P16333 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCK1P16333 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCK1P16333 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCK1P16333 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCK1P16333 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCK1P16333 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NCK1P16333 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
NCK1P16333 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCK1P16333 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.57■□□□□ 0.88
NCK1P16333 AC004987.1-201ENST00000428627 508 ntBASIC20.57■□□□□ 0.88
NCK1P16333 NTF6A-201ENST00000591175 560 ntBASIC20.57■□□□□ 0.88
NCK1P16333 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NCK1P16333 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCK1P16333 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.57■□□□□ 0.88
NCK1P16333 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCK1P16333 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
NCK1P16333 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCK1P16333 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCK1P16333 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NCK1P16333 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NCK1P16333 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCK1P16333 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCK1P16333 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.56■□□□□ 0.88
NCK1P16333 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.56■□□□□ 0.88
NCK1P16333 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NCK1P16333 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCK1P16333 ATP5G2P3-201ENST00000429083 425 ntBASIC20.56■□□□□ 0.88
NCK1P16333 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.56■□□□□ 0.88
NCK1P16333 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NCK1P16333 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NCK1P16333 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCK1P16333 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCK1P16333 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCK1P16333 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCK1P16333 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCK1P16333 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.55■□□□□ 0.88
NCK1P16333 AC073130.3-201ENST00000624389 2278 ntBASIC20.55■□□□□ 0.88
NCK1P16333 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NCK1P16333 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NCK1P16333 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.55■□□□□ 0.88
NCK1P16333 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NCK1P16333 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.55■□□□□ 0.88
NCK1P16333 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCK1P16333 AC074183.2-201ENST00000623112 922 ntBASIC20.55■□□□□ 0.88
NCK1P16333 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCK1P16333 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.55■□□□□ 0.88
NCK1P16333 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.54■□□□□ 0.88
NCK1P16333 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.54■□□□□ 0.88
NCK1P16333 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCK1P16333 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCK1P16333 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCK1P16333 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NCK1P16333 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCK1P16333 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NCK1P16333 FP325331.1-202ENST00000623531 1380 ntBASIC20.54■□□□□ 0.88
NCK1P16333 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCK1P16333 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NCK1P16333 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCK1P16333 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.54■□□□□ 0.88
NCK1P16333 AC244015.2-201ENST00000616358 1861 ntBASIC20.54■□□□□ 0.88
NCK1P16333 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.54■□□□□ 0.88
NCK1P16333 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCK1P16333 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCK1P16333 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCK1P16333 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.53■□□□□ 0.88
NCK1P16333 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCK1P16333 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCK1P16333 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NCK1P16333 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NCK1P16333 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCK1P16333 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.53■□□□□ 0.88
NCK1P16333 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCK1P16333 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.53■□□□□ 0.88
NCK1P16333 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCK1P16333 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.53■□□□□ 0.88
NCK1P16333 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCK1P16333 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCK1P16333 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCK1P16333 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NCK1P16333 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.52■□□□□ 0.88
NCK1P16333 ABHD17AP5-201ENST00000580133 923 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms