Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOBP13765 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOBP13765 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 DUX4L19-201ENST00000557448 1267 ntBASIC19.57■□□□□ 0.72
HLA-DOBP13765 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DOBP13765 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOBP13765 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DOBP13765 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DOBP13765 AC008406.3-201ENST00000620001 1374 ntBASIC19.57■□□□□ 0.72
HLA-DOBP13765 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOBP13765 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOBP13765 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
HLA-DOBP13765 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DOBP13765 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOBP13765 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOBP13765 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HLA-DOBP13765 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
HLA-DOBP13765 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DOBP13765 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DOBP13765 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOBP13765 AC137767.1-201ENST00000602918 1920 ntBASIC19.56■□□□□ 0.72
HLA-DOBP13765 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOBP13765 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DOBP13765 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DOBP13765 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DOBP13765 AC010525.1-201ENST00000585559 441 ntBASIC19.55■□□□□ 0.72
HLA-DOBP13765 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DOBP13765 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOBP13765 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HLA-DOBP13765 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DOBP13765 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DOBP13765 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 AL138724.1-201ENST00000606771 1088 ntBASIC19.54■□□□□ 0.72
HLA-DOBP13765 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DOBP13765 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HLA-DOBP13765 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOBP13765 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HLA-DOBP13765 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 UNC93B3-201ENST00000308076 687 ntBASIC19.53■□□□□ 0.72
HLA-DOBP13765 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HLA-DOBP13765 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.53■□□□□ 0.72
HLA-DOBP13765 OR2I1P-207ENST00000453522 948 ntBASIC19.53■□□□□ 0.72
HLA-DOBP13765 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DOBP13765 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DOBP13765 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DOBP13765 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DOBP13765 AL031602.1-201ENST00000633169 911 ntBASIC19.53■□□□□ 0.72
HLA-DOBP13765 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DOBP13765 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HLA-DOBP13765 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HLA-DOBP13765 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DOBP13765 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DOBP13765 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DOBP13765 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DOBP13765 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DOBP13765 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.52■□□□□ 0.72
HLA-DOBP13765 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.52■□□□□ 0.72
HLA-DOBP13765 CA15P2-201ENST00000611168 834 ntBASIC19.52■□□□□ 0.72
HLA-DOBP13765 AC011298.3-201ENST00000615796 283 ntBASIC19.52■□□□□ 0.72
HLA-DOBP13765 AC136469.2-201ENST00000623944 1028 ntBASIC19.52■□□□□ 0.72
HLA-DOBP13765 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DOBP13765 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DOBP13765 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HLA-DOBP13765 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DOBP13765 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DOBP13765 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DOBP13765 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DOBP13765 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DOBP13765 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.52■□□□□ 0.71
HLA-DOBP13765 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms