Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.11■□□□□ 0.81
PEPDP12955 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.1■□□□□ 0.81
PEPDP12955 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.1■□□□□ 0.81
PEPDP12955 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PEPDP12955 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PEPDP12955 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.1■□□□□ 0.81
PEPDP12955 AC136469.2-201ENST00000623944 1028 ntBASIC20.1■□□□□ 0.81
PEPDP12955 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.1■□□□□ 0.81
PEPDP12955 LINC00565-201ENST00000562710 2331 ntBASIC20.1■□□□□ 0.81
PEPDP12955 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.1■□□□□ 0.81
PEPDP12955 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.1■□□□□ 0.81
PEPDP12955 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
PEPDP12955 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PEPDP12955 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PEPDP12955 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.09■□□□□ 0.81
PEPDP12955 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PEPDP12955 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.09■□□□□ 0.81
PEPDP12955 AC127496.7-201ENST00000625110 1798 ntBASIC20.09■□□□□ 0.81
PEPDP12955 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PEPDP12955 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.09■□□□□ 0.81
PEPDP12955 MIR4767-201ENST00000582827 78 ntBASIC20.09■□□□□ 0.81
PEPDP12955 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PEPDP12955 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PEPDP12955 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PEPDP12955 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PEPDP12955 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PEPDP12955 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.09■□□□□ 0.81
PEPDP12955 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.09■□□□□ 0.81
PEPDP12955 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PEPDP12955 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PEPDP12955 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PEPDP12955 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PEPDP12955 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PEPDP12955 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.08■□□□□ 0.81
PEPDP12955 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
PEPDP12955 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PEPDP12955 AC242852.2-201ENST00000615738 1807 ntBASIC20.08■□□□□ 0.8
PEPDP12955 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
PEPDP12955 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PEPDP12955 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PEPDP12955 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PEPDP12955 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PEPDP12955 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PEPDP12955 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PEPDP12955 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.07■□□□□ 0.8
PEPDP12955 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PEPDP12955 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PEPDP12955 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.07■□□□□ 0.8
PEPDP12955 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PEPDP12955 AC142381.2-201ENST00000566120 298 ntBASIC20.07■□□□□ 0.8
PEPDP12955 AL499627.2-201ENST00000606283 725 ntBASIC20.07■□□□□ 0.8
PEPDP12955 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.07■□□□□ 0.8
PEPDP12955 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.07■□□□□ 0.8
PEPDP12955 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.07■□□□□ 0.8
PEPDP12955 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.07■□□□□ 0.8
PEPDP12955 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEPDP12955 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEPDP12955 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.07■□□□□ 0.8
PEPDP12955 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
PEPDP12955 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.07■□□□□ 0.8
PEPDP12955 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PEPDP12955 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.07■□□□□ 0.8
PEPDP12955 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEPDP12955 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEPDP12955 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEPDP12955 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.06■□□□□ 0.8
PEPDP12955 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PEPDP12955 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PEPDP12955 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.06■□□□□ 0.8
PEPDP12955 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.06■□□□□ 0.8
PEPDP12955 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PEPDP12955 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.06■□□□□ 0.8
PEPDP12955 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEPDP12955 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEPDP12955 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PEPDP12955 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEPDP12955 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms