Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.07■□□□□ 0.32
CD28P10747 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD28P10747 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD28P10747 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.07■□□□□ 0.32
CD28P10747 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CD28P10747 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD28P10747 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD28P10747 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD28P10747 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD28P10747 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CD28P10747 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD28P10747 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD28P10747 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD28P10747 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD28P10747 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CD28P10747 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.06■□□□□ 0.32
CD28P10747 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD28P10747 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD28P10747 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CD28P10747 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD28P10747 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.06■□□□□ 0.32
CD28P10747 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.06■□□□□ 0.32
CD28P10747 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD28P10747 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD28P10747 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.06■□□□□ 0.32
CD28P10747 AC087239.1-201ENST00000622671 572 ntBASIC17.06■□□□□ 0.32
CD28P10747 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD28P10747 AC068587.7-201ENST00000641602 218 ntBASIC17.06■□□□□ 0.32
CD28P10747 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CD28P10747 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD28P10747 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD28P10747 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CD28P10747 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD28P10747 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD28P10747 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD28P10747 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.05■□□□□ 0.32
CD28P10747 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD28P10747 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.05■□□□□ 0.32
CD28P10747 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.05■□□□□ 0.32
CD28P10747 AC010141.3-201ENST00000456659 717 ntBASIC17.05■□□□□ 0.32
CD28P10747 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.05■□□□□ 0.32
CD28P10747 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CD28P10747 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD28P10747 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD28P10747 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD28P10747 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.05■□□□□ 0.32
CD28P10747 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD28P10747 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD28P10747 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD28P10747 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CD28P10747 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD28P10747 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD28P10747 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD28P10747 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.04■□□□□ 0.32
CD28P10747 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.04■□□□□ 0.32
CD28P10747 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD28P10747 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CD28P10747 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.04■□□□□ 0.32
CD28P10747 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD28P10747 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD28P10747 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.04■□□□□ 0.32
CD28P10747 TPRG1LP1-201ENST00000598702 760 ntBASIC17.04■□□□□ 0.32
CD28P10747 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.04■□□□□ 0.32
CD28P10747 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.04■□□□□ 0.32
CD28P10747 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD28P10747 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD28P10747 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD28P10747 BX005040.4-201ENST00000637145 1518 ntBASIC17.03■□□□□ 0.32
CD28P10747 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD28P10747 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.03■□□□□ 0.32
CD28P10747 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD28P10747 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.03■□□□□ 0.32
CD28P10747 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.03■□□□□ 0.32
CD28P10747 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.03■□□□□ 0.32
CD28P10747 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD28P10747 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD28P10747 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CD28P10747 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.03■□□□□ 0.32
CD28P10747 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CD28P10747 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD28P10747 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD28P10747 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD28P10747 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD28P10747 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD28P10747 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD28P10747 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CD28P10747 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD28P10747 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD28P10747 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.02■□□□□ 0.32
CD28P10747 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CD28P10747 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD28P10747 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.02■□□□□ 0.32
CD28P10747 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD28P10747 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD28P10747 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.02■□□□□ 0.32
CD28P10747 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.02■□□□□ 0.32
CD28P10747 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.02■□□□□ 0.32
CD28P10747 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.02■□□□□ 0.32
CD28P10747 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.02■□□□□ 0.32
CD28P10747 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms