Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.97■□□□□ 0.95
CCNYL3P0C7X3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 MIR6084-201ENST00000622012 110 ntBASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL3P0C7X3 C9orf163-202ENST00000624034 2573 ntBASIC20.95■□□□□ 0.95
CCNYL3P0C7X3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.95■□□□□ 0.94
CCNYL3P0C7X3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNYL3P0C7X3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNYL3P0C7X3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNYL3P0C7X3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCNYL3P0C7X3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.94■□□□□ 0.94
CCNYL3P0C7X3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.94■□□□□ 0.94
CCNYL3P0C7X3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCNYL3P0C7X3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.94■□□□□ 0.94
CCNYL3P0C7X3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.94■□□□□ 0.94
CCNYL3P0C7X3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 KRT18P5-201ENST00000436075 1291 ntBASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNYL3P0C7X3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 AC022517.1-201ENST00000592429 346 ntBASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 AL031602.1-201ENST00000633169 911 ntBASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNYL3P0C7X3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms