Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHGBP05060 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHGBP05060 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHGBP05060 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.38■■□□□ 1.81
CHGBP05060 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.38■■□□□ 1.81
CHGBP05060 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CHGBP05060 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHGBP05060 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHGBP05060 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHGBP05060 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHGBP05060 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHGBP05060 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
CHGBP05060 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHGBP05060 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.37■■□□□ 1.81
CHGBP05060 AP005435.1-201ENST00000529293 1178 ntBASIC26.37■■□□□ 1.81
CHGBP05060 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.37■■□□□ 1.81
CHGBP05060 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHGBP05060 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CHGBP05060 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHGBP05060 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.37■■□□□ 1.81
CHGBP05060 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHGBP05060 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHGBP05060 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHGBP05060 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.36■■□□□ 1.81
CHGBP05060 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHGBP05060 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHGBP05060 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHGBP05060 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHGBP05060 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHGBP05060 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHGBP05060 MIR935-201ENST00000401179 91 ntBASIC26.35■■□□□ 1.81
CHGBP05060 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.35■■□□□ 1.81
CHGBP05060 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.35■■□□□ 1.81
CHGBP05060 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHGBP05060 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.35■■□□□ 1.81
CHGBP05060 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CHGBP05060 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHGBP05060 AC080038.3-201ENST00000623346 1952 ntBASIC26.35■■□□□ 1.81
CHGBP05060 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHGBP05060 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.34■■□□□ 1.81
CHGBP05060 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.34■■□□□ 1.81
CHGBP05060 MIR6084-201ENST00000622012 110 ntBASIC26.34■■□□□ 1.81
CHGBP05060 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHGBP05060 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHGBP05060 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHGBP05060 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHGBP05060 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.33■■□□□ 1.81
CHGBP05060 IRS3P-201ENST00000223076 1006 ntBASIC26.33■■□□□ 1.81
CHGBP05060 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.33■■□□□ 1.81
CHGBP05060 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.33■■□□□ 1.81
CHGBP05060 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.33■■□□□ 1.81
CHGBP05060 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHGBP05060 AC137767.1-201ENST00000602918 1920 ntBASIC26.33■■□□□ 1.81
CHGBP05060 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
CHGBP05060 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
CHGBP05060 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHGBP05060 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
CHGBP05060 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.32■■□□□ 1.8
CHGBP05060 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.32■■□□□ 1.8
CHGBP05060 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CHGBP05060 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHGBP05060 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHGBP05060 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHGBP05060 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHGBP05060 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHGBP05060 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CHGBP05060 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
CHGBP05060 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHGBP05060 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.31■■□□□ 1.8
CHGBP05060 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHGBP05060 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CHGBP05060 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CHGBP05060 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHGBP05060 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHGBP05060 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHGBP05060 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.29■■□□□ 1.8
CHGBP05060 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHGBP05060 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHGBP05060 MIR572-201ENST00000384983 95 ntBASIC26.29■■□□□ 1.8
CHGBP05060 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHGBP05060 AC010141.3-201ENST00000456659 717 ntBASIC26.29■■□□□ 1.8
CHGBP05060 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.29■■□□□ 1.8
CHGBP05060 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.29■■□□□ 1.8
CHGBP05060 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.29■■□□□ 1.8
CHGBP05060 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHGBP05060 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHGBP05060 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.29■■□□□ 1.8
CHGBP05060 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.29■■□□□ 1.8
CHGBP05060 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGBP05060 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGBP05060 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.28■■□□□ 1.8
CHGBP05060 AC026271.2-201ENST00000428091 497 ntBASIC26.28■■□□□ 1.8
CHGBP05060 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.28■■□□□ 1.8
CHGBP05060 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.28■■□□□ 1.8
CHGBP05060 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.28■■□□□ 1.8
CHGBP05060 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHGBP05060 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
CHGBP05060 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
CHGBP05060 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.28■■□□□ 1.8
CHGBP05060 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms