Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.53■□□□□ 0.88
MT-ND1P03886 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.52■□□□□ 0.88
MT-ND1P03886 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MT-ND1P03886 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.52■□□□□ 0.88
MT-ND1P03886 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MT-ND1P03886 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
MT-ND1P03886 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND1P03886 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
MT-ND1P03886 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
MT-ND1P03886 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.51■□□□□ 0.87
MT-ND1P03886 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MT-ND1P03886 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-ND1P03886 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND1P03886 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND1P03886 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND1P03886 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND1P03886 AC103724.3-201ENST00000564481 992 ntBASIC20.51■□□□□ 0.87
MT-ND1P03886 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-ND1P03886 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.51■□□□□ 0.87
MT-ND1P03886 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.51■□□□□ 0.87
MT-ND1P03886 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND1P03886 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND1P03886 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND1P03886 KRT8P33-201ENST00000508125 1423 ntBASIC20.51■□□□□ 0.87
MT-ND1P03886 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND1P03886 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND1P03886 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND1P03886 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MT-ND1P03886 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
MT-ND1P03886 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND1P03886 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.5■□□□□ 0.87
MT-ND1P03886 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.5■□□□□ 0.87
MT-ND1P03886 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND1P03886 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND1P03886 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND1P03886 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND1P03886 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND1P03886 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
MT-ND1P03886 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
MT-ND1P03886 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
MT-ND1P03886 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND1P03886 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND1P03886 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND1P03886 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.49■□□□□ 0.87
MT-ND1P03886 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.49■□□□□ 0.87
MT-ND1P03886 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
MT-ND1P03886 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND1P03886 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND1P03886 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND1P03886 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND1P03886 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND1P03886 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
MT-ND1P03886 LINC01960-201ENST00000563759 1884 ntBASIC20.47■□□□□ 0.87
MT-ND1P03886 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
MT-ND1P03886 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.47■□□□□ 0.87
MT-ND1P03886 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND1P03886 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MT-ND1P03886 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.47■□□□□ 0.87
MT-ND1P03886 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.47■□□□□ 0.87
MT-ND1P03886 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND1P03886 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
MT-ND1P03886 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MT-ND1P03886 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND1P03886 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND1P03886 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
MT-ND1P03886 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND1P03886 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
MT-ND1P03886 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MT-ND1P03886 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MT-ND1P03886 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MT-ND1P03886 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.46■□□□□ 0.87
MT-ND1P03886 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.46■□□□□ 0.87
MT-ND1P03886 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms