Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DQB1P01920 DUX4L9-201ENST00000449051 1259 ntBASIC18.87■□□□□ 0.61
HLA-DQB1P01920 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB1P01920 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DQB1P01920 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-DQB1P01920 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB1P01920 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB1P01920 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-DQB1P01920 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB1P01920 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.85■□□□□ 0.61
HLA-DQB1P01920 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DQB1P01920 AF106564.1-201ENST00000607058 2553 ntBASIC18.85■□□□□ 0.61
HLA-DQB1P01920 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 LINC01006-201ENST00000333319 2292 ntBASIC18.84■□□□□ 0.61
HLA-DQB1P01920 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB1P01920 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQB1P01920 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.83■□□□□ 0.61
HLA-DQB1P01920 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQB1P01920 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQB1P01920 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQB1P01920 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.83■□□□□ 0.61
HLA-DQB1P01920 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.83■□□□□ 0.61
HLA-DQB1P01920 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.83■□□□□ 0.61
HLA-DQB1P01920 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DQB1P01920 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB1P01920 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 PKD1P6-201ENST00000343738 4769 ntBASIC18.81■□□□□ 0.6
HLA-DQB1P01920 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms