Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HLA-AP01891 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-AP01891 MIR6765-201ENST00000614092 87 ntBASIC18.37■□□□□ 0.53
HLA-AP01891 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-AP01891 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-AP01891 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-AP01891 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-AP01891 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-AP01891 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-AP01891 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-AP01891 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-AP01891 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-AP01891 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-AP01891 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
HLA-AP01891 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-AP01891 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.36■□□□□ 0.53
HLA-AP01891 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-AP01891 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.36■□□□□ 0.53
HLA-AP01891 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-AP01891 AC092667.1-201ENST00000434301 2586 ntBASIC18.36■□□□□ 0.53
HLA-AP01891 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
HLA-AP01891 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-AP01891 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-AP01891 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-AP01891 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HLA-AP01891 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-AP01891 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-AP01891 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-AP01891 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-AP01891 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HLA-AP01891 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-AP01891 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-AP01891 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-AP01891 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-AP01891 AC004987.1-201ENST00000428627 508 ntBASIC18.34■□□□□ 0.53
HLA-AP01891 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-AP01891 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-AP01891 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-AP01891 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-AP01891 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-AP01891 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-AP01891 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-AP01891 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-AP01891 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-AP01891 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-AP01891 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HLA-AP01891 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-AP01891 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-AP01891 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-AP01891 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-AP01891 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-AP01891 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-AP01891 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-AP01891 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-AP01891 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-AP01891 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-AP01891 ATP5G2P3-201ENST00000429083 425 ntBASIC18.32■□□□□ 0.52
HLA-AP01891 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-AP01891 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-AP01891 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-AP01891 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HLA-AP01891 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-AP01891 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-AP01891 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-AP01891 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HLA-AP01891 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-AP01891 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HLA-AP01891 AC244015.2-201ENST00000616358 1861 ntBASIC18.31■□□□□ 0.52
HLA-AP01891 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-AP01891 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-AP01891 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-AP01891 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HLA-AP01891 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-AP01891 AC012354.3-201ENST00000623734 483 ntBASIC18.31■□□□□ 0.52
HLA-AP01891 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-AP01891 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HLA-AP01891 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-AP01891 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HLA-AP01891 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HLA-AP01891 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-AP01891 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-AP01891 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-AP01891 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-AP01891 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-AP01891 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HLA-AP01891 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-AP01891 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-AP01891 AL033527.3-201ENST00000566366 1196 ntBASIC18.3■□□□□ 0.52
HLA-AP01891 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HLA-AP01891 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
HLA-AP01891 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms