Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC3O95833 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLIC3O95833 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.13■□□□□ 0.81
CLIC3O95833 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC3O95833 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLIC3O95833 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC3O95833 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC3O95833 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC3O95833 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.13■□□□□ 0.81
CLIC3O95833 AC018755.3-202ENST00000596210 929 ntBASIC20.13■□□□□ 0.81
CLIC3O95833 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.13■□□□□ 0.81
CLIC3O95833 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC3O95833 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.13■□□□□ 0.81
CLIC3O95833 LINC01521-201ENST00000504184 1943 ntBASIC20.13■□□□□ 0.81
CLIC3O95833 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC3O95833 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.13■□□□□ 0.81
CLIC3O95833 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC3O95833 Z98882.1-201ENST00000622160 2253 ntBASIC20.13■□□□□ 0.81
CLIC3O95833 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC3O95833 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC3O95833 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.12■□□□□ 0.81
CLIC3O95833 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.12■□□□□ 0.81
CLIC3O95833 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC3O95833 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC3O95833 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC3O95833 FEM1AP4-201ENST00000443167 1987 ntBASIC20.12■□□□□ 0.81
CLIC3O95833 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.12■□□□□ 0.81
CLIC3O95833 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC3O95833 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC3O95833 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC3O95833 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.11■□□□□ 0.81
CLIC3O95833 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC3O95833 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.11■□□□□ 0.81
CLIC3O95833 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC3O95833 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CLIC3O95833 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.11■□□□□ 0.81
CLIC3O95833 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC3O95833 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC3O95833 AC011551.1-201ENST00000614101 683 ntBASIC20.1■□□□□ 0.81
CLIC3O95833 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC3O95833 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.1■□□□□ 0.81
CLIC3O95833 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.1■□□□□ 0.81
CLIC3O95833 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC3O95833 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.1■□□□□ 0.81
CLIC3O95833 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC3O95833 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLIC3O95833 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC3O95833 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC3O95833 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC3O95833 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.09■□□□□ 0.81
CLIC3O95833 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CLIC3O95833 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.09■□□□□ 0.81
CLIC3O95833 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.09■□□□□ 0.81
CLIC3O95833 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC3O95833 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC3O95833 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.09■□□□□ 0.81
CLIC3O95833 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.09■□□□□ 0.81
CLIC3O95833 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC3O95833 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC3O95833 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.08■□□□□ 0.81
CLIC3O95833 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLIC3O95833 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.08■□□□□ 0.81
CLIC3O95833 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC3O95833 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC3O95833 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC3O95833 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC3O95833 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLIC3O95833 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC3O95833 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.08■□□□□ 0.81
CLIC3O95833 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CLIC3O95833 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC3O95833 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC3O95833 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CLIC3O95833 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLIC3O95833 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC3O95833 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC3O95833 AC144652.1-201ENST00000609974 1624 ntBASIC20.07■□□□□ 0.8
CLIC3O95833 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC3O95833 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLIC3O95833 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.07■□□□□ 0.8
CLIC3O95833 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC3O95833 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.07■□□□□ 0.8
CLIC3O95833 LINC01960-201ENST00000563759 1884 ntBASIC20.07■□□□□ 0.8
CLIC3O95833 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC3O95833 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC3O95833 AL391422.3-201ENST00000603791 2761 ntBASIC20.06■□□□□ 0.8
CLIC3O95833 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.06■□□□□ 0.8
CLIC3O95833 LINC01006-201ENST00000333319 2292 ntBASIC20.06■□□□□ 0.8
CLIC3O95833 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.06■□□□□ 0.8
CLIC3O95833 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.06■□□□□ 0.8
CLIC3O95833 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLIC3O95833 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.06■□□□□ 0.8
CLIC3O95833 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.06■□□□□ 0.8
CLIC3O95833 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC3O95833 LONRF2P2-201ENST00000439212 571 ntBASIC20.06■□□□□ 0.8
CLIC3O95833 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CLIC3O95833 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC3O95833 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.06■□□□□ 0.8
CLIC3O95833 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC3O95833 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms