Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.41■□□□□ 0.7
CDRT1O95170 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.41■□□□□ 0.7
CDRT1O95170 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CDRT1O95170 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDRT1O95170 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDRT1O95170 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDRT1O95170 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDRT1O95170 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.4■□□□□ 0.7
CDRT1O95170 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDRT1O95170 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.4■□□□□ 0.7
CDRT1O95170 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDRT1O95170 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDRT1O95170 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDRT1O95170 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
CDRT1O95170 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.39■□□□□ 0.69
CDRT1O95170 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
CDRT1O95170 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.39■□□□□ 0.69
CDRT1O95170 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CDRT1O95170 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDRT1O95170 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CDRT1O95170 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDRT1O95170 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDRT1O95170 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDRT1O95170 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDRT1O95170 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDRT1O95170 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDRT1O95170 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDRT1O95170 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.38■□□□□ 0.69
CDRT1O95170 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.38■□□□□ 0.69
CDRT1O95170 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.37■□□□□ 0.69
CDRT1O95170 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.37■□□□□ 0.69
CDRT1O95170 AC022616.5-201ENST00000518796 181 ntBASIC19.37■□□□□ 0.69
CDRT1O95170 AC019171.1-201ENST00000601251 1056 ntBASIC19.37■□□□□ 0.69
CDRT1O95170 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDRT1O95170 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDRT1O95170 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDRT1O95170 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDRT1O95170 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDRT1O95170 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDRT1O95170 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDRT1O95170 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDRT1O95170 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDRT1O95170 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDRT1O95170 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.36■□□□□ 0.69
CDRT1O95170 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDRT1O95170 ABHD17AP5-201ENST00000580133 923 ntBASIC19.36■□□□□ 0.69
CDRT1O95170 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDRT1O95170 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDRT1O95170 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDRT1O95170 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDRT1O95170 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CDRT1O95170 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.35■□□□□ 0.69
CDRT1O95170 AC244015.2-201ENST00000616358 1861 ntBASIC19.35■□□□□ 0.69
CDRT1O95170 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.35■□□□□ 0.69
CDRT1O95170 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.35■□□□□ 0.69
CDRT1O95170 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 NTF6A-201ENST00000591175 560 ntBASIC19.35■□□□□ 0.69
CDRT1O95170 BHLHE23-202ENST00000612929 1109 ntBASIC19.35■□□□□ 0.69
CDRT1O95170 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 AL157384.1-201ENST00000445995 2473 ntBASIC19.35■□□□□ 0.69
CDRT1O95170 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
CDRT1O95170 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.35■□□□□ 0.69
CDRT1O95170 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDRT1O95170 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDRT1O95170 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDRT1O95170 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDRT1O95170 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDRT1O95170 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.34■□□□□ 0.69
CDRT1O95170 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.34■□□□□ 0.69
CDRT1O95170 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.34■□□□□ 0.69
CDRT1O95170 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDRT1O95170 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms