Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBE4BO95155 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.96■■□□□ 1.43
UBE4BO95155 LINC00526-201ENST00000581067 1875 ntBASIC23.96■■□□□ 1.43
UBE4BO95155 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
UBE4BO95155 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.95■■□□□ 1.43
UBE4BO95155 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
UBE4BO95155 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
UBE4BO95155 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.95■■□□□ 1.42
UBE4BO95155 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.95■■□□□ 1.42
UBE4BO95155 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
UBE4BO95155 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
UBE4BO95155 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
UBE4BO95155 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
UBE4BO95155 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
UBE4BO95155 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
UBE4BO95155 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.94■■□□□ 1.42
UBE4BO95155 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
UBE4BO95155 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.94■■□□□ 1.42
UBE4BO95155 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBE4BO95155 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
UBE4BO95155 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.94■■□□□ 1.42
UBE4BO95155 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
UBE4BO95155 AC079089.2-201ENST00000531211 1277 ntBASIC23.94■■□□□ 1.42
UBE4BO95155 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBE4BO95155 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.94■■□□□ 1.42
UBE4BO95155 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBE4BO95155 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
UBE4BO95155 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
UBE4BO95155 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBE4BO95155 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
UBE4BO95155 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBE4BO95155 AC079834.2-201ENST00000609776 1949 ntBASIC23.93■■□□□ 1.42
UBE4BO95155 PBX2P1-201ENST00000493219 1291 ntBASIC23.93■■□□□ 1.42
UBE4BO95155 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBE4BO95155 AC233992.3-201ENST00000607491 485 ntBASIC23.93■■□□□ 1.42
UBE4BO95155 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBE4BO95155 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBE4BO95155 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.93■■□□□ 1.42
UBE4BO95155 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.93■■□□□ 1.42
UBE4BO95155 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBE4BO95155 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBE4BO95155 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBE4BO95155 EDA-201ENST00000338901 1233 ntBASIC23.92■■□□□ 1.42
UBE4BO95155 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.92■■□□□ 1.42
UBE4BO95155 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.92■■□□□ 1.42
UBE4BO95155 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBE4BO95155 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE4BO95155 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.91■■□□□ 1.42
UBE4BO95155 AC092053.2-201ENST00000640557 1818 ntBASIC23.91■■□□□ 1.42
UBE4BO95155 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE4BO95155 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
UBE4BO95155 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.91■■□□□ 1.42
UBE4BO95155 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.91■■□□□ 1.42
UBE4BO95155 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
UBE4BO95155 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.91■■□□□ 1.42
UBE4BO95155 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE4BO95155 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE4BO95155 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBE4BO95155 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
UBE4BO95155 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE4BO95155 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE4BO95155 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.9■■□□□ 1.42
UBE4BO95155 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
UBE4BO95155 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.9■■□□□ 1.42
UBE4BO95155 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.9■■□□□ 1.42
UBE4BO95155 AC027682.1-201ENST00000562846 899 ntBASIC23.9■■□□□ 1.42
UBE4BO95155 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
UBE4BO95155 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.9■■□□□ 1.42
UBE4BO95155 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE4BO95155 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE4BO95155 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
UBE4BO95155 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE4BO95155 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
UBE4BO95155 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.9■■□□□ 1.42
UBE4BO95155 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.9■■□□□ 1.42
UBE4BO95155 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBE4BO95155 OXCT2P1-201ENST00000447263 1535 ntBASIC23.89■■□□□ 1.42
UBE4BO95155 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
UBE4BO95155 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.89■■□□□ 1.42
UBE4BO95155 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.89■■□□□ 1.42
UBE4BO95155 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.42
UBE4BO95155 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.89■■□□□ 1.42
UBE4BO95155 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.89■■□□□ 1.42
UBE4BO95155 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
UBE4BO95155 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
UBE4BO95155 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
UBE4BO95155 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBE4BO95155 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBE4BO95155 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
UBE4BO95155 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBE4BO95155 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBE4BO95155 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
UBE4BO95155 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
UBE4BO95155 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
UBE4BO95155 AP001330.3-201ENST00000520123 633 ntBASIC23.88■■□□□ 1.41
UBE4BO95155 AC133561.4-201ENST00000566112 224 ntBASIC23.88■■□□□ 1.41
UBE4BO95155 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.88■■□□□ 1.41
UBE4BO95155 AL139246.5-201ENST00000606645 996 ntBASIC23.88■■□□□ 1.41
UBE4BO95155 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.88■■□□□ 1.41
UBE4BO95155 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms