Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NKX2-2O95096 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-2O95096 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-2O95096 SLC47A1P1-202ENST00000449666 945 ntBASIC20.21■□□□□ 0.83
NKX2-2O95096 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.21■□□□□ 0.83
NKX2-2O95096 MIR4767-201ENST00000582827 78 ntBASIC20.21■□□□□ 0.83
NKX2-2O95096 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-2O95096 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-2O95096 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-2O95096 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.21■□□□□ 0.83
NKX2-2O95096 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.83
NKX2-2O95096 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.2■□□□□ 0.82
NKX2-2O95096 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
NKX2-2O95096 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.2■□□□□ 0.82
NKX2-2O95096 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.2■□□□□ 0.82
NKX2-2O95096 AC096631.2-201ENST00000436136 790 ntBASIC20.2■□□□□ 0.82
NKX2-2O95096 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.2■□□□□ 0.82
NKX2-2O95096 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.2■□□□□ 0.82
NKX2-2O95096 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.2■□□□□ 0.82
NKX2-2O95096 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NKX2-2O95096 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 AC135279.3-201ENST00000610945 1311 ntBASIC20.2■□□□□ 0.82
NKX2-2O95096 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-2O95096 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 AC092053.2-201ENST00000640557 1818 ntBASIC20.19■□□□□ 0.82
NKX2-2O95096 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.19■□□□□ 0.82
NKX2-2O95096 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NKX2-2O95096 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.19■□□□□ 0.82
NKX2-2O95096 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.19■□□□□ 0.82
NKX2-2O95096 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.19■□□□□ 0.82
NKX2-2O95096 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-2O95096 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.18■□□□□ 0.82
NKX2-2O95096 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-2O95096 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
NKX2-2O95096 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NKX2-2O95096 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.18■□□□□ 0.82
NKX2-2O95096 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.18■□□□□ 0.82
NKX2-2O95096 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NKX2-2O95096 AP005435.1-201ENST00000529293 1178 ntBASIC20.18■□□□□ 0.82
NKX2-2O95096 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.18■□□□□ 0.82
NKX2-2O95096 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.18■□□□□ 0.82
NKX2-2O95096 AC087239.1-201ENST00000622671 572 ntBASIC20.18■□□□□ 0.82
NKX2-2O95096 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-2O95096 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-2O95096 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.18■□□□□ 0.82
NKX2-2O95096 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NKX2-2O95096 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NKX2-2O95096 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NKX2-2O95096 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NKX2-2O95096 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NKX2-2O95096 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
NKX2-2O95096 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NKX2-2O95096 BX842568.3-201ENST00000418104 571 ntBASIC20.17■□□□□ 0.82
NKX2-2O95096 AC010141.3-201ENST00000456659 717 ntBASIC20.17■□□□□ 0.82
NKX2-2O95096 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.17■□□□□ 0.82
NKX2-2O95096 AC079089.2-201ENST00000531211 1277 ntBASIC20.17■□□□□ 0.82
NKX2-2O95096 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.17■□□□□ 0.82
NKX2-2O95096 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NKX2-2O95096 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NKX2-2O95096 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NKX2-2O95096 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NKX2-2O95096 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NKX2-2O95096 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.17■□□□□ 0.82
NKX2-2O95096 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
NKX2-2O95096 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.17■□□□□ 0.82
NKX2-2O95096 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
NKX2-2O95096 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NKX2-2O95096 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.16■□□□□ 0.82
NKX2-2O95096 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NKX2-2O95096 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NKX2-2O95096 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NKX2-2O95096 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NKX2-2O95096 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NKX2-2O95096 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
NKX2-2O95096 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NKX2-2O95096 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NKX2-2O95096 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
NKX2-2O95096 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NKX2-2O95096 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NKX2-2O95096 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKX2-2O95096 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
NKX2-2O95096 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKX2-2O95096 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms