Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX30O94993 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SOX30O94993 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SOX30O94993 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX30O94993 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX30O94993 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX30O94993 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SOX30O94993 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.27■□□□□ 0.84
SOX30O94993 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.27■□□□□ 0.84
SOX30O94993 AC136469.2-201ENST00000623944 1028 ntBASIC20.27■□□□□ 0.84
SOX30O94993 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX30O94993 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.27■□□□□ 0.84
SOX30O94993 AC092053.2-201ENST00000640557 1818 ntBASIC20.27■□□□□ 0.84
SOX30O94993 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
SOX30O94993 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.27■□□□□ 0.83
SOX30O94993 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SOX30O94993 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX30O94993 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX30O94993 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.26■□□□□ 0.83
SOX30O94993 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX30O94993 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.26■□□□□ 0.83
SOX30O94993 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.26■□□□□ 0.83
SOX30O94993 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOX30O94993 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.26■□□□□ 0.83
SOX30O94993 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SOX30O94993 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX30O94993 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX30O94993 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX30O94993 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SOX30O94993 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX30O94993 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.25■□□□□ 0.83
SOX30O94993 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.25■□□□□ 0.83
SOX30O94993 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.25■□□□□ 0.83
SOX30O94993 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.25■□□□□ 0.83
SOX30O94993 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.25■□□□□ 0.83
SOX30O94993 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SOX30O94993 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
SOX30O94993 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX30O94993 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SOX30O94993 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX30O94993 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX30O94993 AC137767.1-201ENST00000602918 1920 ntBASIC20.24■□□□□ 0.83
SOX30O94993 SERBP1P1-201ENST00000396021 1160 ntBASIC20.24■□□□□ 0.83
SOX30O94993 MIR935-201ENST00000401179 91 ntBASIC20.24■□□□□ 0.83
SOX30O94993 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SOX30O94993 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SOX30O94993 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.24■□□□□ 0.83
SOX30O94993 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
SOX30O94993 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SOX30O94993 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SOX30O94993 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SOX30O94993 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX30O94993 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SOX30O94993 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
SOX30O94993 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SOX30O94993 AL136116.3-201ENST00000402907 1138 ntBASIC20.23■□□□□ 0.83
SOX30O94993 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SOX30O94993 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.23■□□□□ 0.83
SOX30O94993 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.23■□□□□ 0.83
SOX30O94993 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX30O94993 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX30O94993 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SOX30O94993 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX30O94993 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX30O94993 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SOX30O94993 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SOX30O94993 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.23■□□□□ 0.83
SOX30O94993 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SOX30O94993 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.22■□□□□ 0.83
SOX30O94993 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX30O94993 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX30O94993 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX30O94993 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX30O94993 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SOX30O94993 AP005435.1-201ENST00000529293 1178 ntBASIC20.22■□□□□ 0.83
SOX30O94993 AC079089.2-201ENST00000531211 1277 ntBASIC20.22■□□□□ 0.83
SOX30O94993 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.22■□□□□ 0.83
SOX30O94993 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX30O94993 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX30O94993 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SOX30O94993 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
SOX30O94993 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.21■□□□□ 0.83
SOX30O94993 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX30O94993 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX30O94993 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX30O94993 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SOX30O94993 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX30O94993 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SOX30O94993 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.21■□□□□ 0.83
SOX30O94993 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SOX30O94993 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms