Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AL499627.2-201ENST00000606283 725 ntBASIC21.01■□□□□ 0.95
CNOT3O75175 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CNOT3O75175 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT3O75175 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT3O75175 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT3O75175 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 AC133637.1-201ENST00000624115 1537 ntBASIC21■□□□□ 0.95
CNOT3O75175 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 DUX4L4-201ENST00000566884 1269 ntBASIC21■□□□□ 0.95
CNOT3O75175 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21■□□□□ 0.95
CNOT3O75175 MPST-208ENST00000628507 698 ntTSL 5 BASIC21■□□□□ 0.95
CNOT3O75175 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CNOT3O75175 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21■□□□□ 0.95
CNOT3O75175 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 AC144652.1-201ENST00000609974 1624 ntBASIC21■□□□□ 0.95
CNOT3O75175 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21■□□□□ 0.95
CNOT3O75175 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT3O75175 C1orf229-201ENST00000623686 2258 ntBASIC20.99■□□□□ 0.95
CNOT3O75175 FP325331.1-202ENST00000623531 1380 ntBASIC20.99■□□□□ 0.95
CNOT3O75175 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT3O75175 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT3O75175 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CNOT3O75175 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT3O75175 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CNOT3O75175 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT3O75175 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT3O75175 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT3O75175 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT3O75175 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT3O75175 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CNOT3O75175 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT3O75175 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT3O75175 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT3O75175 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.98■□□□□ 0.95
CNOT3O75175 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.98■□□□□ 0.95
CNOT3O75175 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.98■□□□□ 0.95
CNOT3O75175 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.98■□□□□ 0.95
CNOT3O75175 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT3O75175 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.98■□□□□ 0.95
CNOT3O75175 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT3O75175 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.98■□□□□ 0.95
CNOT3O75175 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT3O75175 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CNOT3O75175 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.98■□□□□ 0.95
CNOT3O75175 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
CNOT3O75175 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.97■□□□□ 0.95
CNOT3O75175 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.97■□□□□ 0.95
CNOT3O75175 IRS3P-201ENST00000223076 1006 ntBASIC20.97■□□□□ 0.95
CNOT3O75175 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.97■□□□□ 0.95
CNOT3O75175 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.97■□□□□ 0.95
CNOT3O75175 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.97■□□□□ 0.95
CNOT3O75175 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CNOT3O75175 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT3O75175 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CNOT3O75175 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CNOT3O75175 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.96■□□□□ 0.95
CNOT3O75175 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.96■□□□□ 0.95
CNOT3O75175 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CNOT3O75175 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.96■□□□□ 0.95
CNOT3O75175 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.96■□□□□ 0.95
CNOT3O75175 AC010525.1-201ENST00000585559 441 ntBASIC20.96■□□□□ 0.95
CNOT3O75175 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CNOT3O75175 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT3O75175 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CNOT3O75175 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.95
CNOT3O75175 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CNOT3O75175 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.95■□□□□ 0.95
CNOT3O75175 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
CNOT3O75175 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms