Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX2O60749 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
SNX2O60749 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX2O60749 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SNX2O60749 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX2O60749 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX2O60749 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SNX2O60749 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX2O60749 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX2O60749 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX2O60749 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX2O60749 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.8■■□□□ 1.08
SNX2O60749 AC099791.1-201ENST00000416440 715 ntBASIC21.8■■□□□ 1.08
SNX2O60749 ZNRF2P3-201ENST00000424200 374 ntBASIC21.8■■□□□ 1.08
SNX2O60749 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX2O60749 AC105265.2-201ENST00000467189 838 ntBASIC21.8■■□□□ 1.08
SNX2O60749 AC091305.1-201ENST00000479476 895 ntBASIC21.8■■□□□ 1.08
SNX2O60749 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.8■■□□□ 1.08
SNX2O60749 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.8■■□□□ 1.08
SNX2O60749 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX2O60749 AC027682.1-201ENST00000562846 899 ntBASIC21.8■■□□□ 1.08
SNX2O60749 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX2O60749 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX2O60749 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX2O60749 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX2O60749 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX2O60749 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX2O60749 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX2O60749 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX2O60749 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SNX2O60749 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.79■■□□□ 1.08
SNX2O60749 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.79■■□□□ 1.08
SNX2O60749 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SNX2O60749 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.79■■□□□ 1.08
SNX2O60749 CA15P2-201ENST00000611168 834 ntBASIC21.79■■□□□ 1.08
SNX2O60749 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.79■■□□□ 1.08
SNX2O60749 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SNX2O60749 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SNX2O60749 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX2O60749 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX2O60749 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SNX2O60749 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX2O60749 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX2O60749 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX2O60749 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX2O60749 RASA4CP-201ENST00000424092 1398 ntBASIC21.78■■□□□ 1.08
SNX2O60749 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX2O60749 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX2O60749 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX2O60749 AL499627.2-201ENST00000606283 725 ntBASIC21.78■■□□□ 1.08
SNX2O60749 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX2O60749 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX2O60749 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SNX2O60749 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX2O60749 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SNX2O60749 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX2O60749 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX2O60749 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX2O60749 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX2O60749 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX2O60749 AC233992.3-201ENST00000607491 485 ntBASIC21.77■■□□□ 1.08
SNX2O60749 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX2O60749 GUSBP5-202ENST00000510805 1989 ntBASIC21.77■■□□□ 1.08
SNX2O60749 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNX2O60749 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SNX2O60749 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX2O60749 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX2O60749 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
SNX2O60749 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SNX2O60749 ESRRAP2-201ENST00000418437 1549 ntBASIC21.76■■□□□ 1.07
SNX2O60749 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX2O60749 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX2O60749 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.76■■□□□ 1.07
SNX2O60749 BX842568.3-201ENST00000418104 571 ntBASIC21.76■■□□□ 1.07
SNX2O60749 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX2O60749 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX2O60749 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX2O60749 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX2O60749 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX2O60749 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX2O60749 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SNX2O60749 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX2O60749 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SNX2O60749 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX2O60749 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 SLC47A1P1-202ENST00000449666 945 ntBASIC21.75■■□□□ 1.07
SNX2O60749 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX2O60749 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.75■■□□□ 1.07
SNX2O60749 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX2O60749 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX2O60749 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SNX2O60749 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms