Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAF3IP2O43734 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 AC139530.1-201ENST00000575312 1977 ntBASIC19.45■□□□□ 0.7
TRAF3IP2O43734 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 AC110285.6-201ENST00000617652 491 ntBASIC19.45■□□□□ 0.7
TRAF3IP2O43734 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRAF3IP2O43734 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 AC068587.7-201ENST00000641602 218 ntBASIC19.44■□□□□ 0.7
TRAF3IP2O43734 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF3IP2O43734 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF3IP2O43734 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 AC106739.1-201ENST00000617035 715 ntBASIC19.42■□□□□ 0.7
TRAF3IP2O43734 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 EP400NL-214ENST00000641289 2402 ntBASIC19.42■□□□□ 0.7
TRAF3IP2O43734 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP2O43734 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 LINC00526-201ENST00000581067 1875 ntBASIC19.41■□□□□ 0.7
TRAF3IP2O43734 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 BX842568.3-201ENST00000418104 571 ntBASIC19.41■□□□□ 0.7
TRAF3IP2O43734 PBX2P1-201ENST00000493219 1291 ntBASIC19.41■□□□□ 0.7
TRAF3IP2O43734 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TRAF3IP2O43734 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms