Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.63■□□□□ 0.89
RRP8O43159 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RRP8O43159 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RRP8O43159 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RRP8O43159 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RRP8O43159 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RRP8O43159 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RRP8O43159 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RRP8O43159 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RRP8O43159 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RRP8O43159 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RRP8O43159 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RRP8O43159 AC144652.1-201ENST00000609974 1624 ntBASIC20.62■□□□□ 0.89
RRP8O43159 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RRP8O43159 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RRP8O43159 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RRP8O43159 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.61■□□□□ 0.89
RRP8O43159 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.61■□□□□ 0.89
RRP8O43159 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RRP8O43159 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RRP8O43159 POU5F1P3-201ENST00000428824 1078 ntBASIC20.61■□□□□ 0.89
RRP8O43159 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RRP8O43159 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.61■□□□□ 0.89
RRP8O43159 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RRP8O43159 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RRP8O43159 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RRP8O43159 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RRP8O43159 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RRP8O43159 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RRP8O43159 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RRP8O43159 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
RRP8O43159 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RRP8O43159 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RRP8O43159 AC073210.2-201ENST00000430369 194 ntBASIC20.6■□□□□ 0.89
RRP8O43159 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.6■□□□□ 0.89
RRP8O43159 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.6■□□□□ 0.89
RRP8O43159 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
RRP8O43159 ITM2C-210ENST00000620962 501 ntBASIC20.6■□□□□ 0.89
RRP8O43159 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RRP8O43159 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RRP8O43159 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RRP8O43159 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.6■□□□□ 0.89
RRP8O43159 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RRP8O43159 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RRP8O43159 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RRP8O43159 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.59■□□□□ 0.89
RRP8O43159 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.59■□□□□ 0.89
RRP8O43159 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.59■□□□□ 0.89
RRP8O43159 DUX4L16-201ENST00000555130 1264 ntBASIC20.59■□□□□ 0.89
RRP8O43159 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.59■□□□□ 0.89
RRP8O43159 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RRP8O43159 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RRP8O43159 AP006294.2-201ENST00000641667 209 ntBASIC20.59■□□□□ 0.89
RRP8O43159 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RRP8O43159 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RRP8O43159 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RRP8O43159 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.58■□□□□ 0.89
RRP8O43159 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
RRP8O43159 AF201337.1-201ENST00000520239 748 ntBASIC20.58■□□□□ 0.89
RRP8O43159 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.58■□□□□ 0.89
RRP8O43159 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RRP8O43159 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.58■□□□□ 0.88
RRP8O43159 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.58■□□□□ 0.88
RRP8O43159 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RRP8O43159 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RRP8O43159 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.57■□□□□ 0.88
RRP8O43159 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RRP8O43159 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.57■□□□□ 0.88
RRP8O43159 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RRP8O43159 SMUG1P1-201ENST00000590640 811 ntBASIC20.57■□□□□ 0.88
RRP8O43159 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RRP8O43159 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RRP8O43159 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RRP8O43159 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RRP8O43159 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.56■□□□□ 0.88
RRP8O43159 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RRP8O43159 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.56■□□□□ 0.88
RRP8O43159 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.56■□□□□ 0.88
RRP8O43159 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RRP8O43159 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RRP8O43159 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.56■□□□□ 0.88
RRP8O43159 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RRP8O43159 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RRP8O43159 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RRP8O43159 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RRP8O43159 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RRP8O43159 AC010141.3-201ENST00000456659 717 ntBASIC20.55■□□□□ 0.88
RRP8O43159 AC104187.1-201ENST00000607510 612 ntBASIC20.55■□□□□ 0.88
RRP8O43159 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RRP8O43159 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RRP8O43159 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RRP8O43159 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RRP8O43159 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.54■□□□□ 0.88
RRP8O43159 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RRP8O43159 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RRP8O43159 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RRP8O43159 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.54■□□□□ 0.88
RRP8O43159 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.54■□□□□ 0.88
RRP8O43159 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.54■□□□□ 0.88
RRP8O43159 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms