Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA5O15230 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.53■□□□□ 0.88
LAMA5O15230 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.53■□□□□ 0.88
LAMA5O15230 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LAMA5O15230 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LAMA5O15230 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA5O15230 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LAMA5O15230 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.52■□□□□ 0.88
LAMA5O15230 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.52■□□□□ 0.88
LAMA5O15230 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LAMA5O15230 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.52■□□□□ 0.88
LAMA5O15230 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMA5O15230 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
LAMA5O15230 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.52■□□□□ 0.88
LAMA5O15230 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMA5O15230 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LAMA5O15230 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LAMA5O15230 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.51■□□□□ 0.87
LAMA5O15230 AC010331.1-201ENST00000611423 582 ntBASIC20.51■□□□□ 0.87
LAMA5O15230 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.51■□□□□ 0.87
LAMA5O15230 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMA5O15230 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LAMA5O15230 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.51■□□□□ 0.87
LAMA5O15230 AC144652.1-201ENST00000609974 1624 ntBASIC20.51■□□□□ 0.87
LAMA5O15230 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
LAMA5O15230 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LAMA5O15230 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.51■□□□□ 0.87
LAMA5O15230 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.51■□□□□ 0.87
LAMA5O15230 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
LAMA5O15230 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LAMA5O15230 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.5■□□□□ 0.87
LAMA5O15230 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.5■□□□□ 0.87
LAMA5O15230 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.5■□□□□ 0.87
LAMA5O15230 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.5■□□□□ 0.87
LAMA5O15230 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.5■□□□□ 0.87
LAMA5O15230 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.5■□□□□ 0.87
LAMA5O15230 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LAMA5O15230 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.5■□□□□ 0.87
LAMA5O15230 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LAMA5O15230 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.49■□□□□ 0.87
LAMA5O15230 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.49■□□□□ 0.87
LAMA5O15230 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LAMA5O15230 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.49■□□□□ 0.87
LAMA5O15230 RPS2P4-201ENST00000476944 856 ntBASIC20.49■□□□□ 0.87
LAMA5O15230 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.49■□□□□ 0.87
LAMA5O15230 AC104187.1-201ENST00000607510 612 ntBASIC20.49■□□□□ 0.87
LAMA5O15230 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.49■□□□□ 0.87
LAMA5O15230 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LAMA5O15230 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LAMA5O15230 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.49■□□□□ 0.87
LAMA5O15230 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LAMA5O15230 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LAMA5O15230 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LAMA5O15230 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMA5O15230 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMA5O15230 MYC-209ENST00000641252 345 ntBASIC20.48■□□□□ 0.87
LAMA5O15230 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMA5O15230 AL121749.1-202ENST00000609313 2153 ntBASIC20.48■□□□□ 0.87
LAMA5O15230 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMA5O15230 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.48■□□□□ 0.87
LAMA5O15230 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.48■□□□□ 0.87
LAMA5O15230 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.48■□□□□ 0.87
LAMA5O15230 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.48■□□□□ 0.87
LAMA5O15230 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.48■□□□□ 0.87
LAMA5O15230 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LAMA5O15230 RARRES2P4-201ENST00000514074 484 ntBASIC20.48■□□□□ 0.87
LAMA5O15230 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LAMA5O15230 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LAMA5O15230 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.47■□□□□ 0.87
LAMA5O15230 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LAMA5O15230 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMA5O15230 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMA5O15230 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.47■□□□□ 0.87
LAMA5O15230 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMA5O15230 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.47■□□□□ 0.87
LAMA5O15230 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.47■□□□□ 0.87
LAMA5O15230 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.47■□□□□ 0.87
LAMA5O15230 MIR4497-201ENST00000583208 89 ntBASIC20.47■□□□□ 0.87
LAMA5O15230 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMA5O15230 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMA5O15230 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMA5O15230 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.47■□□□□ 0.87
LAMA5O15230 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LAMA5O15230 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.47■□□□□ 0.87
LAMA5O15230 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.47■□□□□ 0.87
LAMA5O15230 MIR6089-201ENST00000616698 64 ntBASIC20.47■□□□□ 0.87
LAMA5O15230 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LAMA5O15230 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LAMA5O15230 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LAMA5O15230 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms