Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIRPB1O00241 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.42■□□□□ 0.54
SIRPB1O00241 SRD5A1P1-201ENST00000442297 786 ntBASIC18.42■□□□□ 0.54
SIRPB1O00241 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.42■□□□□ 0.54
SIRPB1O00241 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIRPB1O00241 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIRPB1O00241 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIRPB1O00241 LINC00565-201ENST00000562710 2331 ntBASIC18.41■□□□□ 0.54
SIRPB1O00241 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SIRPB1O00241 AC139530.1-201ENST00000575312 1977 ntBASIC18.41■□□□□ 0.54
SIRPB1O00241 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIRPB1O00241 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIRPB1O00241 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SIRPB1O00241 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.41■□□□□ 0.54
SIRPB1O00241 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIRPB1O00241 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.41■□□□□ 0.54
SIRPB1O00241 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.41■□□□□ 0.54
SIRPB1O00241 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIRPB1O00241 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIRPB1O00241 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIRPB1O00241 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.41■□□□□ 0.54
SIRPB1O00241 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.4■□□□□ 0.54
SIRPB1O00241 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SIRPB1O00241 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SIRPB1O00241 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SIRPB1O00241 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.4■□□□□ 0.54
SIRPB1O00241 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SIRPB1O00241 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.4■□□□□ 0.54
SIRPB1O00241 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 AL512631.2-201ENST00000604634 923 ntBASIC18.4■□□□□ 0.54
SIRPB1O00241 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.4■□□□□ 0.54
SIRPB1O00241 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.4■□□□□ 0.54
SIRPB1O00241 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.4■□□□□ 0.54
SIRPB1O00241 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPB1O00241 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.4■□□□□ 0.54
SIRPB1O00241 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.4■□□□□ 0.54
SIRPB1O00241 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.39■□□□□ 0.54
SIRPB1O00241 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SIRPB1O00241 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
SIRPB1O00241 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.39■□□□□ 0.53
SIRPB1O00241 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SIRPB1O00241 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.39■□□□□ 0.53
SIRPB1O00241 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SIRPB1O00241 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.39■□□□□ 0.53
SIRPB1O00241 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPB1O00241 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.39■□□□□ 0.53
SIRPB1O00241 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SIRPB1O00241 AC133637.1-201ENST00000624115 1537 ntBASIC18.39■□□□□ 0.53
SIRPB1O00241 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SIRPB1O00241 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 AC092053.2-201ENST00000640557 1818 ntBASIC18.38■□□□□ 0.53
SIRPB1O00241 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.38■□□□□ 0.53
SIRPB1O00241 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SIRPB1O00241 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.38■□□□□ 0.53
SIRPB1O00241 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.38■□□□□ 0.53
SIRPB1O00241 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.38■□□□□ 0.53
SIRPB1O00241 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPB1O00241 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPB1O00241 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPB1O00241 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
SIRPB1O00241 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.37■□□□□ 0.53
SIRPB1O00241 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SIRPB1O00241 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.37■□□□□ 0.53
SIRPB1O00241 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPB1O00241 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.37■□□□□ 0.53
SIRPB1O00241 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPB1O00241 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPB1O00241 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms