Protein–RNA interactions for Protein: O00231

PSMD11, 26S proteasome non-ATPase regulatory subunit 11, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11O00231 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
PSMD11O00231 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PSMD11O00231 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PSMD11O00231 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
PSMD11O00231 AL358852.1-201ENST00000623174 1268 ntBASIC21.81■■□□□ 1.08
PSMD11O00231 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
PSMD11O00231 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PSMD11O00231 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.8■■□□□ 1.08
PSMD11O00231 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.8■■□□□ 1.08
PSMD11O00231 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMD11O00231 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
PSMD11O00231 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PSMD11O00231 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PSMD11O00231 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PSMD11O00231 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.79■■□□□ 1.08
PSMD11O00231 AL354811.1-201ENST00000610286 706 ntBASIC21.79■■□□□ 1.08
PSMD11O00231 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.79■■□□□ 1.08
PSMD11O00231 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.79■■□□□ 1.08
PSMD11O00231 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PSMD11O00231 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PSMD11O00231 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PSMD11O00231 OXCT2P1-201ENST00000447263 1535 ntBASIC21.79■■□□□ 1.08
PSMD11O00231 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PSMD11O00231 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.79■■□□□ 1.08
PSMD11O00231 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.78■■□□□ 1.08
PSMD11O00231 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PSMD11O00231 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PSMD11O00231 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PSMD11O00231 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.78■■□□□ 1.08
PSMD11O00231 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PSMD11O00231 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.78■■□□□ 1.08
PSMD11O00231 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD11O00231 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD11O00231 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.77■■□□□ 1.08
PSMD11O00231 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD11O00231 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.77■■□□□ 1.08
PSMD11O00231 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.77■■□□□ 1.08
PSMD11O00231 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD11O00231 AC012414.1-201ENST00000556676 535 ntBASIC21.77■■□□□ 1.08
PSMD11O00231 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.77■■□□□ 1.08
PSMD11O00231 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.77■■□□□ 1.08
PSMD11O00231 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD11O00231 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.77■■□□□ 1.08
PSMD11O00231 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD11O00231 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.77■■□□□ 1.08
PSMD11O00231 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
PSMD11O00231 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PSMD11O00231 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PSMD11O00231 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PSMD11O00231 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PSMD11O00231 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PSMD11O00231 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.76■■□□□ 1.07
PSMD11O00231 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.76■■□□□ 1.07
PSMD11O00231 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.76■■□□□ 1.07
PSMD11O00231 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.76■■□□□ 1.07
PSMD11O00231 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.76■■□□□ 1.07
PSMD11O00231 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PSMD11O00231 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PSMD11O00231 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.76■■□□□ 1.07
PSMD11O00231 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PSMD11O00231 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD11O00231 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.75■■□□□ 1.07
PSMD11O00231 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD11O00231 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD11O00231 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PSMD11O00231 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PSMD11O00231 AC012676.1-201ENST00000574705 1949 ntBASIC21.75■■□□□ 1.07
PSMD11O00231 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PSMD11O00231 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD11O00231 MIR935-201ENST00000401179 91 ntBASIC21.75■■□□□ 1.07
PSMD11O00231 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.75■■□□□ 1.07
PSMD11O00231 AC105233.4-201ENST00000642045 216 ntBASIC21.75■■□□□ 1.07
PSMD11O00231 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD11O00231 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD11O00231 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD11O00231 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PSMD11O00231 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD11O00231 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PSMD11O00231 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PSMD11O00231 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PSMD11O00231 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PSMD11O00231 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PSMD11O00231 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PSMD11O00231 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PSMD11O00231 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.73■■□□□ 1.07
PSMD11O00231 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PSMD11O00231 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
PSMD11O00231 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.73■■□□□ 1.07
PSMD11O00231 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PSMD11O00231 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms