Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHKB-CPT1BH3BT56 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC12.24□□□□□ -0.45
CHKB-CPT1BH3BT56 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC12.23□□□□□ -0.45
CHKB-CPT1BH3BT56 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 AC026471.1-201ENST00000564629 3026 ntBASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC12.22□□□□□ -0.45
CHKB-CPT1BH3BT56 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.21□□□□□ -0.45
CHKB-CPT1BH3BT56 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHKB-CPT1BH3BT56 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHKB-CPT1BH3BT56 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHKB-CPT1BH3BT56 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CHKB-CPT1BH3BT56 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms