Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 AC079089.2-201ENST00000531211 1277 ntBASIC19.4■□□□□ 0.7
NPIPB4C9JG80 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB4C9JG80 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NPIPB4C9JG80 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 LINC00565-201ENST00000562710 2331 ntBASIC19.38■□□□□ 0.69
NPIPB4C9JG80 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NPIPB4C9JG80 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB4C9JG80 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 AC010141.3-201ENST00000456659 717 ntBASIC19.36■□□□□ 0.69
NPIPB4C9JG80 AP005435.1-201ENST00000529293 1178 ntBASIC19.36■□□□□ 0.69
NPIPB4C9JG80 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB4C9JG80 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB4C9JG80 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB4C9JG80 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms