Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 Z92544.1-202ENST00000571933 1220 ntBASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF103-CHMP3A0A140T963 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF103-CHMP3A0A140T963 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF103-CHMP3A0A140T963 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 FBXW4P1-201ENST00000426721 2239 ntBASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 MTDHP2-201ENST00000601468 714 ntBASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 MIR4787-201ENST00000607364 84 ntBASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF103-CHMP3A0A140T963 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF103-CHMP3A0A140T963 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF103-CHMP3A0A140T963 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF103-CHMP3A0A140T963 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RNF103-CHMP3A0A140T963 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.89■□□□□ 0.94
RNF103-CHMP3A0A140T963 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF103-CHMP3A0A140T963 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
RNF103-CHMP3A0A140T963 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF103-CHMP3A0A140T963 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF103-CHMP3A0A140T963 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF103-CHMP3A0A140T963 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF103-CHMP3A0A140T963 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF103-CHMP3A0A140T963 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF103-CHMP3A0A140T963 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF103-CHMP3A0A140T963 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 AC139530.1-201ENST00000575312 1977 ntBASIC20.88■□□□□ 0.93
RNF103-CHMP3A0A140T963 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 AC239859.2-201ENST00000444165 318 ntBASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 AC009299.2-201ENST00000482477 511 ntBASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms