Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PIMREG-206ENST00000572595 1551 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC1A1P43005 AC009533.1-201ENST00000539757 3158 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 FBXO34-202ENST00000440021 2831 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SLC1A1P43005 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 LRRC2-201ENST00000296144 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 NDRG4-203ENST00000394279 3431 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC1A1P43005 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC1A1P43005 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC1A1P43005 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SLC1A1P43005 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC1A1P43005 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 CCND3P1-201ENST00000438347 580 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC1A1P43005 HLA-DRB9-201ENST00000449413 343 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC1A1P43005 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC1A1P43005 PGAM1P12-201ENST00000505622 748 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC1A1P43005 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC1A1P43005 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.33□□□□□ -0.28
SLC1A1P43005 AC010202.1-201ENST00000551181 405 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC1A1P43005 AP005264.6-204ENST00000588436 719 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 AC008622.3-201ENST00000621170 600 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC1A1P43005 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC1A1P43005 AL590683.1-201ENST00000439059 1849 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
SLC1A1P43005 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC1A1P43005 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SLC1A1P43005 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SLC1A1P43005 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC1A1P43005 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 AC018521.1-202ENST00000641877 2655 ntBASIC13.33□□□□□ -0.28
SLC1A1P43005 CT55-202ENST00000344129 1728 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC1A1P43005 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC1A1P43005 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC1A1P43005 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 FAM90A22P-201ENST00000400142 1395 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 AC008663.2-201ENST00000517299 1777 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.32□□□□□ -0.28
SLC1A1P43005 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC1A1P43005 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 GOLGA6L10-208ENST00000619556 4306 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 AC026904.1-201ENST00000430626 3549 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC1A1P43005 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SLC1A1P43005 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC13.32□□□□□ -0.28
SLC1A1P43005 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 PTGS1-201ENST00000223423 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SLC1A1P43005 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SLC1A1P43005 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SLC1A1P43005 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SLC1A1P43005 NRADDP-201ENST00000437305 691 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 AC006328.1-201ENST00000437571 379 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 AC133141.1-201ENST00000443015 339 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 AL135901.1-201ENST00000451812 333 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 RN7SL494P-201ENST00000461517 304 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 AREG-202ENST00000502307 956 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 AC093909.3-201ENST00000504783 336 ntBASIC13.32□□□□□ -0.28
SLC1A1P43005 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SLC1A1P43005 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.32□□□□□ -0.28
SLC1A1P43005 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.32□□□□□ -0.28
SLC1A1P43005 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SLC1A1P43005 AC092535.4-201ENST00000609548 397 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms