Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC073488.1-201ENST00000416620 1600 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC118758.2-201ENST00000614242 2813 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 ALOX15P2-201ENST00000340858 1897 ntBASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 PGAM1P10-201ENST00000402426 761 ntBASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 B9D1-206ENST00000461069 923 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 RN7SL452P-201ENST00000482923 291 ntBASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 MYL6-210ENST00000548400 573 ntTSL 3 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 OR4C3-202ENST00000611380 597 ntBASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 YAP1P1-201ENST00000401504 1393 ntBASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPA3F8WFD2 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPA3F8WFD2 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms