Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 AC122688.3-201ENST00000623804 3467 ntBASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 AC011511.5-201ENST00000589379 3219 ntBASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 AC010336.1-201ENST00000539278 4739 ntBASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PRICKLE4Q2TBC4 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AL121772.1-201ENST00000618303 2335 ntTSL 2 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 REXO1L1P-201ENST00000379010 6598 ntBASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AL031590.1-202ENST00000641466 1737 ntBASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 CHMP2A-201ENST00000312547 913 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 OR4X1-201ENST00000320048 918 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AL121994.1-201ENST00000413189 402 ntBASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 RN7SL2-201ENST00000490232 300 ntBASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 ACY3-202ENST00000529256 933 ntTSL 3 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AC126471.1-201ENST00000550676 362 ntBASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AC018868.2-201ENST00000559655 1259 ntBASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 RN7SL4P-201ENST00000584058 295 ntBASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 CHMP2A-206ENST00000600118 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 RN7SL341P-201ENST00000613745 298 ntBASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 RBP1-206ENST00000617459 667 ntTSL 2 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 CD9-212ENST00000610354 1315 ntTSL 5 BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
PRICKLE4Q2TBC4 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 POTEB-202ENST00000439682 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 LINC00664-201ENST00000596203 1742 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 FAM95B1-212ENST00000592873 4692 ntBASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PRICKLE4Q2TBC4 SNORD88B-201ENST00000408454 91 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms