Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 GEMIN8P4-201ENST00000380526 729 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 AL080243.1-201ENST00000423293 1060 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.37□□□□□ -0.27
SLC1A1P43005 DUX4L31-201ENST00000446466 1136 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 RN7SL147P-201ENST00000487345 298 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 AC114812.4-201ENST00000506676 757 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SLC1A1P43005 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 AL132780.4-201ENST00000624870 1135 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.37□□□□□ -0.27
SLC1A1P43005 GRAMD1B-203ENST00000456860 2805 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SLC1A1P43005 LHFPL5-201ENST00000360215 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 METTL4-203ENST00000574538 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
SLC1A1P43005 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 KIF18BP1-201ENST00000567585 2264 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SLC1A1P43005 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SLC1A1P43005 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC13.36□□□□□ -0.27
SLC1A1P43005 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SLC1A1P43005 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SLC1A1P43005 SNORA52-201ENST00000362915 134 ntBASIC13.36□□□□□ -0.27
SLC1A1P43005 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.36□□□□□ -0.27
SLC1A1P43005 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.36□□□□□ -0.27
SLC1A1P43005 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 HINT2P1-201ENST00000419438 481 ntBASIC13.36□□□□□ -0.27
SLC1A1P43005 LINC01503-201ENST00000423122 545 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC1A1P43005 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 KRT18P46-201ENST00000435568 1279 ntBASIC13.36□□□□□ -0.27
SLC1A1P43005 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC1A1P43005 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC1A1P43005 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SLC1A1P43005 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.36□□□□□ -0.27
SLC1A1P43005 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.36□□□□□ -0.27
SLC1A1P43005 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC13.36□□□□□ -0.27
SLC1A1P43005 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC13.36□□□□□ -0.27
SLC1A1P43005 PEBP1P2-201ENST00000603980 558 ntBASIC13.36□□□□□ -0.27
SLC1A1P43005 PRKN-210ENST00000612540 603 ntTSL 5 BASIC13.36□□□□□ -0.27
SLC1A1P43005 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.36□□□□□ -0.27
SLC1A1P43005 AC138466.4-201ENST00000623965 852 ntBASIC13.36□□□□□ -0.27
SLC1A1P43005 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.36□□□□□ -0.27
SLC1A1P43005 AC068587.10-201ENST00000641210 219 ntBASIC13.36□□□□□ -0.27
SLC1A1P43005 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
SLC1A1P43005 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC1A1P43005 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SLC1A1P43005 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SLC1A1P43005 AL031590.1-202ENST00000641466 1737 ntBASIC13.36□□□□□ -0.27
SLC1A1P43005 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC1A1P43005 AC005682.1-201ENST00000452069 1467 ntBASIC13.36□□□□□ -0.27
SLC1A1P43005 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 AP000897.1-201ENST00000584036 1613 ntBASIC13.35□□□□□ -0.27
SLC1A1P43005 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SLC1A1P43005 TUBAL3-202ENST00000479328 1505 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC1A1P43005 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms