Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 HMGB3P4-201ENST00000428776 514 ntBASIC13.39□□□□□ -0.27
SLC1A1P43005 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.39□□□□□ -0.27
SLC1A1P43005 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.39□□□□□ -0.27
SLC1A1P43005 HNRNPA1P55-201ENST00000505935 955 ntBASIC13.39□□□□□ -0.27
SLC1A1P43005 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 AC093367.1-201ENST00000517332 420 ntBASIC13.39□□□□□ -0.27
SLC1A1P43005 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 AC078814.4-201ENST00000546650 327 ntBASIC13.39□□□□□ -0.27
SLC1A1P43005 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC13.39□□□□□ -0.27
SLC1A1P43005 MIR4688-201ENST00000577966 83 ntBASIC13.39□□□□□ -0.27
SLC1A1P43005 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.39□□□□□ -0.27
SLC1A1P43005 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC1A1P43005 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC1A1P43005 WDR25-206ENST00000554998 1952 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SLC1A1P43005 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC1A1P43005 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 POTEB-202ENST00000439682 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 LINC01442-202ENST00000618872 1600 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 PKMP1-201ENST00000455804 1523 ntBASIC13.39□□□□□ -0.27
SLC1A1P43005 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 LINC01561-201ENST00000369071 2176 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 BTN2A2-206ENST00000469230 1790 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 AC011239.2-201ENST00000624820 1489 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 SULT1A4-201ENST00000360423 1390 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 HLF-202ENST00000430986 1385 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 ACBD5-205ENST00000396271 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SLC1A1P43005 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC13.38□□□□□ -0.27
SLC1A1P43005 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 AC004522.1-201ENST00000419978 654 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 HLA-DPA2-205ENST00000433582 733 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 AC012362.1-201ENST00000434906 739 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 AL136084.1-201ENST00000449172 318 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 IGHV3-37-201ENST00000518544 340 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 AC080023.2-201ENST00000532615 208 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 MIR4472-1-201ENST00000584349 80 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 AC005332.2-201ENST00000590010 930 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 AL160191.2-201ENST00000603975 601 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.38□□□□□ -0.27
SLC1A1P43005 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 GBP1P1-201ENST00000394662 1740 ntBASIC13.38□□□□□ -0.27
SLC1A1P43005 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SLC1A1P43005 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 AP001198.1-201ENST00000586278 1852 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC1A1P43005 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC1A1P43005 AC008158.1-201ENST00000578759 3668 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 TMEM106B-202ENST00000396668 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 AL672207.1-201ENST00000328462 1570 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SLC1A1P43005 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 LINC00923-201ENST00000503768 2036 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 FUT10-211ENST00000524021 2042 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 LRRC8E-206ENST00000618098 3743 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SLC1A1P43005 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SLC1A1P43005 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 AL109809.1-201ENST00000418979 1367 ntBASIC13.37□□□□□ -0.27
SLC1A1P43005 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC1A1P43005 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.37□□□□□ -0.27
SLC1A1P43005 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SLC1A1P43005 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms