Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 AC008158.1-201ENST00000578759 3668 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 KIF18BP1-201ENST00000567585 2264 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCN2BO60939 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC12.15□□□□□ -0.46
SCN2BO60939 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC12.15□□□□□ -0.46
SCN2BO60939 CYP2B7P-201ENST00000541697 1476 ntBASIC12.15□□□□□ -0.46
SCN2BO60939 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SCN2BO60939 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCN2BO60939 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCN2BO60939 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCN2BO60939 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SCN2BO60939 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
SCN2BO60939 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC12.15□□□□□ -0.46
SCN2BO60939 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SCN2BO60939 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCN2BO60939 AL356653.1-201ENST00000402743 360 ntBASIC12.15□□□□□ -0.46
SCN2BO60939 AC010086.2-201ENST00000428616 226 ntBASIC12.15□□□□□ -0.46
SCN2BO60939 RPSAP12-201ENST00000435879 888 ntBASIC12.15□□□□□ -0.46
SCN2BO60939 ASS1P2-201ENST00000439895 1223 ntBASIC12.15□□□□□ -0.46
SCN2BO60939 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.15□□□□□ -0.46
SCN2BO60939 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC12.15□□□□□ -0.46
SCN2BO60939 OR4A49P-201ENST00000527050 632 ntBASIC12.15□□□□□ -0.46
SCN2BO60939 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC12.15□□□□□ -0.46
SCN2BO60939 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC12.15□□□□□ -0.46
SCN2BO60939 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC12.15□□□□□ -0.46
SCN2BO60939 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.15□□□□□ -0.46
SCN2BO60939 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.15□□□□□ -0.46
SCN2BO60939 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.15□□□□□ -0.46
SCN2BO60939 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCN2BO60939 COX6A1P2-201ENST00000620597 330 ntBASIC12.15□□□□□ -0.46
SCN2BO60939 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCN2BO60939 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
SCN2BO60939 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SCN2BO60939 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SCN2BO60939 LRRC8E-206ENST00000618098 3743 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
SCN2BO60939 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SCN2BO60939 IP6K3-202ENST00000451316 2012 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
SCN2BO60939 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.47
SCN2BO60939 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SCN2BO60939 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SCN2BO60939 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 TMEM100-205ENST00000575734 1962 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SCN2BO60939 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
SCN2BO60939 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
SCN2BO60939 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC12.14□□□□□ -0.47
SCN2BO60939 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC12.14□□□□□ -0.47
SCN2BO60939 ATF4P4-201ENST00000393544 1930 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC12.14□□□□□ -0.47
SCN2BO60939 OR4X1-201ENST00000320048 918 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SCN2BO60939 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 IQCF4-203ENST00000428561 420 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 GAPDHP29-201ENST00000429913 985 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC12.14□□□□□ -0.47
SCN2BO60939 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC12.14□□□□□ -0.47
SCN2BO60939 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.14□□□□□ -0.47
SCN2BO60939 NPM1P43-201ENST00000558669 786 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC12.14□□□□□ -0.47
SCN2BO60939 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC12.14□□□□□ -0.47
SCN2BO60939 MIR3147-201ENST00000577811 66 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 RN7SL678P-201ENST00000579533 299 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 AC015936.1-201ENST00000591013 1028 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 AC008972.2-201ENST00000606587 494 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 AC018635.2-201ENST00000608625 364 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.14□□□□□ -0.47
SCN2BO60939 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC12.14□□□□□ -0.47
SCN2BO60939 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC12.14□□□□□ -0.47
SCN2BO60939 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.14□□□□□ -0.47
SCN2BO60939 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 TMEM106B-202ENST00000396668 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC12.14□□□□□ -0.47
SCN2BO60939 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCN2BO60939 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SCN2BO60939 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SCN2BO60939 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SCN2BO60939 PKP4P1-201ENST00000426801 2158 ntBASIC12.13□□□□□ -0.47
SCN2BO60939 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SCN2BO60939 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms