Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC090510.3-201ENST00000615831 821 ntBASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 AL356585.2-201ENST00000625078 2396 ntBASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 COG6-212ENST00000630730 186 ntTSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AOC4P-203ENST00000566825 2289 ntBASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 RN7SL672P-201ENST00000474091 317 ntBASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 RN7SL478P-201ENST00000584358 298 ntBASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 RPS5-205ENST00000598495 800 ntTSL 3 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AC090950.1-202ENST00000605733 644 ntBASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NPIPA3F8WFD2 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AC009093.9-201ENST00000566038 1611 ntBASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NPIPA3F8WFD2 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms