Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAF6Q9Y4K3 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAF6Q9Y4K3 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAF6Q9Y4K3 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TRAF6Q9Y4K3 ACBD5-205ENST00000396271 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAF6Q9Y4K3 AC018521.1-202ENST00000641877 2655 ntBASIC12.55□□□□□ -0.4
TRAF6Q9Y4K3 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 STK16-202ENST00000409260 1493 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AL358933.1-201ENST00000565046 2830 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 IP6K3-202ENST00000451316 2012 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 CDX2-201ENST00000381020 4053 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AC092506.1-202ENST00000401022 528 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 GAPDHP67-201ENST00000422905 788 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AC104961.1-201ENST00000427605 771 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 RN7SL769P-201ENST00000469386 295 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 OARD1-214ENST00000486443 764 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 TMCO5B-205ENST00000530020 894 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AC091304.3-201ENST00000566500 716 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AC026336.4-201ENST00000624565 1050 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AC002044.2-201ENST00000624910 970 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 LINC00355-201ENST00000456627 1878 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 KCNMB3-203ENST00000392685 1608 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 TMEM100-205ENST00000575734 1962 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 GLDN-210ENST00000612989 1676 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AC064850.1-201ENST00000413279 1398 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AC010969.2-201ENST00000602458 3231 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 KRT8P38-201ENST00000441370 1430 ntBASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAF6Q9Y4K3 ELMO2-201ENST00000290246 3669 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 LINC01443-202ENST00000584531 1854 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 FAM47DP-201ENST00000402340 3290 ntBASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 COQ4-202ENST00000372875 928 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
TRAF6Q9Y4K3 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms