Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SCN2BO60939 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 HNRNPA1P8-201ENST00000436090 951 ntBASIC12.21□□□□□ -0.45
SCN2BO60939 AADAC-202ENST00000488869 719 ntTSL 2 BASIC12.21□□□□□ -0.45
SCN2BO60939 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 MIR4763-201ENST00000581461 92 ntBASIC12.21□□□□□ -0.45
SCN2BO60939 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC12.21□□□□□ -0.45
SCN2BO60939 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC12.21□□□□□ -0.45
SCN2BO60939 TLE2-205ENST00000586422 389 ntTSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SCN2BO60939 ETV2-207ENST00000619399 994 ntTSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 AC068587.10-201ENST00000641210 219 ntBASIC12.21□□□□□ -0.45
SCN2BO60939 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 CLEC17A-203ENST00000547437 2065 ntTSL 2 BASIC12.21□□□□□ -0.45
SCN2BO60939 CCT7P1-201ENST00000406551 1611 ntBASIC12.21□□□□□ -0.46
SCN2BO60939 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SCN2BO60939 AC084855.2-201ENST00000559400 2393 ntTSL 2 BASIC12.21□□□□□ -0.46
SCN2BO60939 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SCN2BO60939 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SCN2BO60939 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SCN2BO60939 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SCN2BO60939 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC12.21□□□□□ -0.46
SCN2BO60939 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SCN2BO60939 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
SCN2BO60939 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC12.2□□□□□ -0.46
SCN2BO60939 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SCN2BO60939 MRGPRX2-201ENST00000329773 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SCN2BO60939 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC12.2□□□□□ -0.46
SCN2BO60939 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SCN2BO60939 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC12.2□□□□□ -0.46
SCN2BO60939 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SCN2BO60939 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 HLA-DMA-202ENST00000395303 1007 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC12.2□□□□□ -0.46
SCN2BO60939 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.2□□□□□ -0.46
SCN2BO60939 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.2□□□□□ -0.46
SCN2BO60939 AC015818.1-201ENST00000451011 244 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC12.2□□□□□ -0.46
SCN2BO60939 RN7SL128P-201ENST00000467883 305 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 AC112250.1-201ENST00000504640 745 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 RNA5SP420-201ENST00000516997 137 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 AC090136.2-201ENST00000517809 420 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 AP003398.1-201ENST00000531124 318 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC12.2□□□□□ -0.46
SCN2BO60939 RHOQP1-201ENST00000555758 579 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 AC079328.1-201ENST00000560358 952 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 AP000894.1-201ENST00000584430 520 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC12.2□□□□□ -0.46
SCN2BO60939 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.2□□□□□ -0.46
SCN2BO60939 AC105137.3-201ENST00000617588 984 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 AC009533.1-201ENST00000539757 3158 ntBASIC12.2□□□□□ -0.46
SCN2BO60939 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC12.2□□□□□ -0.46
SCN2BO60939 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC12.2□□□□□ -0.46
SCN2BO60939 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCN2BO60939 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SCN2BO60939 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 LINC01561-201ENST00000369071 2176 ntBASIC12.19□□□□□ -0.46
SCN2BO60939 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.19□□□□□ -0.46
SCN2BO60939 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.19□□□□□ -0.46
SCN2BO60939 PSG9-201ENST00000244293 2073 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SCN2BO60939 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC12.19□□□□□ -0.46
SCN2BO60939 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.19□□□□□ -0.46
SCN2BO60939 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SCN2BO60939 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.19□□□□□ -0.46
SCN2BO60939 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms