Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 AC005041.3-201ENST00000606287 649 ntBASIC12.22□□□□□ -0.45
CLK1P49759 MIR6842-201ENST00000612539 65 ntBASIC12.22□□□□□ -0.45
CLK1P49759 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 SLC33A1-201ENST00000359479 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 PRKAR1A-217ENST00000589228 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 PPP1R26P5-201ENST00000416640 3664 ntBASIC12.22□□□□□ -0.45
CLK1P49759 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CLK1P49759 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CLK1P49759 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
CLK1P49759 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CLK1P49759 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CLK1P49759 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC12.21□□□□□ -0.45
CLK1P49759 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CLK1P49759 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC12.21□□□□□ -0.45
CLK1P49759 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CLK1P49759 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 AFG3L2P1-201ENST00000521792 1763 ntBASIC12.21□□□□□ -0.45
CLK1P49759 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.21□□□□□ -0.45
CLK1P49759 GNG10P1-201ENST00000452289 199 ntBASIC12.21□□□□□ -0.45
CLK1P49759 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.21□□□□□ -0.45
CLK1P49759 AC104212.2-201ENST00000478813 628 ntBASIC12.21□□□□□ -0.45
CLK1P49759 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.21□□□□□ -0.45
CLK1P49759 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.21□□□□□ -0.45
CLK1P49759 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CLK1P49759 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.21□□□□□ -0.45
CLK1P49759 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.21□□□□□ -0.45
CLK1P49759 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CLK1P49759 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLK1P49759 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CLK1P49759 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLK1P49759 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC12.21□□□□□ -0.46
CLK1P49759 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CLK1P49759 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC12.21□□□□□ -0.46
CLK1P49759 ATP8B3-202ENST00000525591 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLK1P49759 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CLK1P49759 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLK1P49759 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC12.21□□□□□ -0.46
CLK1P49759 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.21□□□□□ -0.46
CLK1P49759 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLK1P49759 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.46
CLK1P49759 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC12.21□□□□□ -0.46
CLK1P49759 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLK1P49759 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
CLK1P49759 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CLK1P49759 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLK1P49759 LINC01561-201ENST00000369071 2176 ntBASIC12.2□□□□□ -0.46
CLK1P49759 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC12.2□□□□□ -0.46
CLK1P49759 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC12.2□□□□□ -0.46
CLK1P49759 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC12.2□□□□□ -0.46
CLK1P49759 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLK1P49759 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.2□□□□□ -0.46
CLK1P49759 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLK1P49759 FUCA1P1-201ENST00000374476 1351 ntBASIC12.2□□□□□ -0.46
CLK1P49759 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLK1P49759 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLK1P49759 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms